RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 TPRP12270 2363 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 CEP295Q9C0D2 2601 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 FEZF1A0PJY2 475 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 TLCD2A6NGC4 264 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 HNRNPCL1O60812 293 aaKnown RBP13.46□□□□□ -0.25
MSRA-201ENST00000317173 MYO1DO94832 1006 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 CDK4P11802 303 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 CDH3P22223 829 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 BCL6P41182 706 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 ACSM2AQ08AH3 577 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 SQSTM1Q13501 440 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 UBAP2LQ14157 1087 aaKnown RBP13.46□□□□□ -0.25
MSRA-201ENST00000317173 HERC3Q15034 1050 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 RPS6KA2Q15349 733 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 MAPRE2Q15555 327 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 TMEM35AQ53FP2 167 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 CACHD1Q5VU97 1274 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 ACSM2BQ68CK6 577 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 ADNP2Q6IQ32 1131 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 RNF44Q7L0R7 432 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 SLCO6A1Q86UG4 719 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 TRIM73Q86UV7 250 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 PLXDC1Q8IUK5 500 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 FAM20CQ8IXL6 584 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 CMTM5Q96DZ9 223 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 C11orf24Q96F05 449 aaPredicted RBP13.46□□□□□ -0.25
MSRA-201ENST00000317173 CNTNAP3BQ96NU0 1288 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 CNTNAP3Q9BZ76 1288 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 TOR4AQ9NXH8 423 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 ZIM2Q9NZV7 527 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 GIMAP2Q9UG22 337 aa13.46□□□□□ -0.25
MSRA-201ENST00000317173 LY6G6EA0A0G2JKS1 128 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 ERICH4A6NGS2 130 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 PSMD12O00232 456 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 CAPN5O15484 640 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 LCMT2O60294 686 aaKnown RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 CKMT1AP12532 417 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 ALDH4A1P30038 563 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 TBL3Q12788 808 aaKnown RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 BNIP1Q12981 228 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 ZIC1Q15915 447 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 CLPPQ16740 277 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 PROX2Q3B8N5 592 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 LACTB2Q53H82 288 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 DEPDC1Q5TB30 811 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 IL23RQ5VWK5 629 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 KHDRBS2Q5VWX1 349 aaKnown RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 FCRL6Q6DN72 434 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 IRGCQ6NXR0 463 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 GALNT18Q6P9A2 607 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 WDR74Q6RFH5 385 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 SPRED1Q7Z699 444 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 CREB3L4Q8TEY5 395 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 CHTF18Q8WVB6 975 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 CCDC74AQ96AQ1 378 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 APIPQ96GX9 242 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 DPYSL5Q9BPU6 564 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 ZFYVE21Q9BQ24 234 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 TXLNGQ9NUQ3 528 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 PILRAQ9UKJ1 303 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 G3BP2Q9UN86 482 aaKnown RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 MSRB2Q9Y3D2 182 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 U3KQA8 63 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 MN1Q10571 1320 aaPredicted RBP13.45□□□□□ -0.26
MSRA-201ENST00000317173 CHD8Q9HCK8 2581 aa13.45□□□□□ -0.26
MSRA-201ENST00000317173 ETHE1O95571 254 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 TGFB1P01137 390 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 C9P02748 559 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 SPINK2P20155 84 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 GPX3P22352 226 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 CALB2P22676 271 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 PIK3R1P27986 724 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 LSSP48449 732 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 MNAT1P51948 309 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 DIO3P55073 304 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 OR1D5P58170 312 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 ILKQ13418 452 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 PWP1Q13610 501 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 ADPRMQ3LIE5 342 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
MSRA-201ENST00000317173 MANEAQ5SRI9 462 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 NOXRED1Q6NXP6 359 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 FBXO42Q6P3S6 717 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 TREML1Q86YW5 311 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 METTL4Q8N3J2 472 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 RNF175Q8N4F7 328 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 ZNF655Q8N720 491 aaPredicted RBP13.44□□□□□ -0.26
MSRA-201ENST00000317173 C19orf47Q8N9M1 422 aaKnown RBP13.44□□□□□ -0.26
MSRA-201ENST00000317173 SRFBP1Q8NEF9 429 aaKnown RBP13.44□□□□□ -0.26
MSRA-201ENST00000317173 RP9Q8TA86 221 aaKnown RBP13.44□□□□□ -0.26
MSRA-201ENST00000317173 NT5CQ8TCD5 201 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 TSPEARQ8WU66 669 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 NCSTNQ92542 709 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 TCTN2Q96GX1 697 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 NSL1Q96IY1 281 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 MARK4Q96L34 752 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 QRFPRQ96P65 431 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 TRAPPC9Q96Q05 1148 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 OR2A5Q96R48 311 aa13.44□□□□□ -0.26
MSRA-201ENST00000317173 C1orf50Q9BV19 199 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms