RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 A8MV72 311 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 TFECO14948 347 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 PRAMEF4O60810 478 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 JUNDP17535 347 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 PREPP48147 710 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 SELENBP1Q13228 472 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 C5orf22Q49AR2 442 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 PRAMEF9Q5VWM5 478 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 LRRC70Q7Z2Q7 622 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 SERPINA11Q86U17 422 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 DCAF4L2Q8NA75 395 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CENPOQ9BU64 300 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 FBXO8Q9NRD0 319 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 ERVK13-1Q9NX77 482 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 LSM7Q9UK45 103 aaKnown RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 NAALAD2Q9Y3Q0 740 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 A0A1W2PRU2 124 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 E7EQ34 232 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 KPNA5O15131 536 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CCNKO75909 580 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 SOD2P04179 222 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 XPAP23025 273 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 PTPN6P29350 595 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 WEE1P30291 646 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 EIF2DP41214 584 aaKnown RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 SLC19A1P41440 591 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 DEFA1P59665 94 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 DEFA3P59666 94 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 PPIGQ13427 754 aaKnown RBP eCLIP14.35□□□□□ -0.11
TFE3-201ENST00000315869 ZXDCQ2QGD7 858 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 DGKKQ5KSL6 1271 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 IER5LQ5T953 404 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CBLL1Q75N03 491 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TMPRSS11BQ86T26 416 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 LYSMD2Q8IV50 215 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CACTIN-AS1Q8N1I8 211 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 MINDY2Q8NBR6 621 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 ZNF566Q969W8 418 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 VPS35Q96QK1 796 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 PCDHGA6Q9Y5G7 932 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 J3KTA2 159 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 GFRA2O00451 464 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CD70P32970 193 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CRISP3P54108 245 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CXCR4P61073 352 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 DOC2AQ14183 400 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 SF3B4Q15427 424 aaKnown RBP eCLIP14.35□□□□□ -0.111e-6■■■■□ 22.4
TFE3-201ENST00000315869 CCBE1Q6UXH8 406 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 CMTM8Q8IZV2 173 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 C2orf73Q8N5S3 287 aaPredicted RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 KBTBD8Q8NFY9 601 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TESCQ96BS2 214 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TMEM175Q9BSA9 504 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 MMP27Q9H306 513 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TMEM184CQ9NVA4 438 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 CFAP97Q9P2B7 532 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 ANKMY1Q9P2S6 941 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 DNMT3BQ9UBC3 853 aaKnown RBP14.35□□□□□ -0.11
TFE3-201ENST00000315869 ERVK-11Q9UQG0 969 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TRIOBPQ9H2D6 2365 aa14.35□□□□□ -0.11
TFE3-201ENST00000315869 TTC36A6NLP5 189 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 LOC110117498-PIK3R3F6TDL0 507 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 YY2O15391 372 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 CCL16O15467 120 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 RFPL2O75678 378 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 PTHP01270 115 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 SPNP16150 400 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 MAGEA2P43356 314 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 PRMT2P55345 433 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 SMARCB1Q12824 385 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 USP43Q70EL4 1123 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 RAVER1Q8IY67 606 aaKnown RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 ELMOD1Q8N336 334 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 WDR36Q8NI36 951 aaKnown RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 ATL1Q8WXF7 558 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 GGHQ92820 318 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 CORO1BQ9BR76 489 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 KLF16Q9BXK1 252 aaPredicted RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 ABCB8Q9NUT2 735 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 MS4A12Q9NXJ0 267 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 RUVBL1Q9Y265 456 aaKnown RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 PCDHB11Q9Y5F2 797 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 PCDHGB1Q9Y5G3 927 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 AGAP5A6NIR3 686 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 PDZK1P1A8MUH7 402 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 TCEA1P23193 301 aaKnown RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 SOX6P35712 828 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 KCNC4Q03721 635 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 LMAN2Q12907 356 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 TSTQ16762 297 aaKnown RBP14.34□□□□□ -0.11
TFE3-201ENST00000315869 EXOC3L2Q2M3D2 409 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 FAM217AQ8IXS0 508 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 OR2AP1Q8NGE2 309 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 NFKBIDQ8NI38 313 aa14.34□□□□□ -0.11
TFE3-201ENST00000315869 STARD8Q92502 1023 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms