RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CD72P21854 359 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 SPIN4Q56A73 249 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 XKR6Q5GH73 641 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 PRSS55Q6UWB4 352 aaPredicted RBP13.34□□□□□ -0.27
MKS1-201ENST00000313863 CCDC190Q86UF4 302 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 TRIM69Q86WT6 500 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 SLC44A2Q8IWA5 706 aaPredicted RBP13.34□□□□□ -0.27
MKS1-201ENST00000313863 SLC22A15Q8IZD6 547 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 LGI4Q8N135 537 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 OR4C15Q8NGM1 316 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 WDR20Q8TBZ3 569 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 CAPSLQ8WWF8 208 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 CLP1Q92989 425 aaKnown RBP13.34□□□□□ -0.27
MKS1-201ENST00000313863 CASD1Q96PB1 797 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 OR51E2Q9H255 320 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 NEK6Q9HC98 313 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 CCDC177Q9NQR7 707 aaPredicted RBP13.34□□□□□ -0.27
MKS1-201ENST00000313863 CLN6Q9NWW5 311 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 GPR83Q9NYM4 423 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 ZNF221Q9UK13 617 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 LRFN2Q9ULH4 789 aa13.34□□□□□ -0.27
MKS1-201ENST00000313863 FAM172BPA6NC97 362 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 MGAT4DA6NG13 374 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 K7ERQ8 282 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 RNASET2O00584 256 aaKnown RBP13.33□□□□□ -0.27
MKS1-201ENST00000313863 SPNP16150 400 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 GABRB1P18505 474 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 ITPKAP23677 461 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 LIMK1P53667 647 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 PNLIPRP1P54315 467 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.27
MKS1-201ENST00000313863 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 VEPH1Q14D04 833 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 GRHL2Q6ISB3 625 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 CRTC1Q6UUV9 634 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 GDPD3Q7L5L3 318 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 OR4A15Q8NGL6 344 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 UTP15Q8TED0 518 aaKnown RBP13.33□□□□□ -0.27
MKS1-201ENST00000313863 COQ8BQ96D53 544 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 SCRN2Q96FV2 425 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 SLC30A2Q9BRI3 323 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 RNF38Q9H0F5 515 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 SIAEQ9HAT2 523 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 RAD18Q9NS91 495 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 BACE2Q9Y5Z0 518 aa13.33□□□□□ -0.27
MKS1-201ENST00000313863 H0YIV9 168 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 CCRL2O00421 344 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 KMOO15229 486 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 PTHP01270 115 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 RPL3P39023 403 aaKnown RBP13.33□□□□□ -0.28
MKS1-201ENST00000313863 SLC15A1P46059 708 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 CDH12P55289 794 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 PFN3P60673 137 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 DMC1Q14565 340 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 MBTPS1Q14703 1052 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 SF3B4Q15427 424 aaKnown RBP eCLIP13.33□□□□□ -0.282e-6■■■■■ 32.5
MKS1-201ENST00000313863 GCNT6Q5T4J0 391 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 TRAF7Q6Q0C0 670 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 C19orf48Q6RUI8 117 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 GDPGP1Q6ZNW5 385 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 FAM92BQ6ZTR7 304 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 NLRP8Q86W28 1048 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 SLC7A5P1Q8MH63 180 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 IL17RDQ8NFM7 739 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 GEMIN6Q8WXD5 167 aaKnown RBP13.33□□□□□ -0.28
MKS1-201ENST00000313863 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
MKS1-201ENST00000313863 P2RY13Q9BPV8 354 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 BHLHE41Q9C0J9 482 aaPredicted RBP13.33□□□□□ -0.28
MKS1-201ENST00000313863 ABCG8Q9H221 673 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
MKS1-201ENST00000313863 HCN4Q9Y3Q4 1203 aa13.33□□□□□ -0.28
MKS1-201ENST00000313863 CXorf51AA0A1B0GTR3 108 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 ARRDC5A6NEK1 342 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 NPIPB15A6NHN6 443 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 IDH3BO43837 385 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 KIAA0513O60268 411 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 ANXA4P09525 319 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 HSMCR30P0CW71 290 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 PIPP12273 146 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 ATP1B2P14415 290 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 OR1D2P34982 312 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 NUDT6P53370 316 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 CRYBA2P53672 197 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 OR2B6P58173 313 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 SNRPD1P62314 119 aaKnown RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 B4GALNT1Q00973 533 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 EXOC3L2Q2M3D2 409 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 ZXDCQ2QGD7 858 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 ATP13A5Q4VNC0 1218 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 Q6ZPB1 254 aaPredicted RBP13.32□□□□□ -0.28
MKS1-201ENST00000313863 SLC30A8Q8IWU4 369 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 B3GNT7Q8NFL0 401 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 OR2AP1Q8NGE2 309 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 WBP2Q969T9 261 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 Q96MT0 163 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 SNX18Q96RF0 628 aa13.32□□□□□ -0.28
MKS1-201ENST00000313863 CCM2Q9BSQ5 444 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms