RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 STMN4Q9H169 189 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 IPPKQ9H8X2 491 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 SYNPO2LQ9H987 977 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 AKIRIN1Q9H9L7 192 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 MKS1Q9NXB0 559 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 ZNF282Q9UDV7 671 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 NXT1Q9UKK6 140 aaKnown RBP10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 PCTPQ9UKL6 214 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 TCFL5Q9UL49 500 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 STK38LQ9Y2H1 464 aa10.46□□□□□ -0.73
CSPG4P1Y-201ENST00000306641 A0A088AWK7 358 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CDC14CA4D256 554 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 H0YIG0 161 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TERTO14746 1132 aaKnown RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CLEC3AO75596 197 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SUPT7LO94864 414 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NSA2O95478 260 aaKnown RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OTCP00480 354 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SERPINA6P08185 405 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZNF888P0CJ79 500 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 EPORP19235 508 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ITGAXP20702 1163 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZNF10P21506 573 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CASP2P42575 452 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 HERVK_113P63132 956 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SLC18A2Q05940 514 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TGM3Q08188 693 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DSG2Q14126 1118 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ERV3-1Q14264 604 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CRTC2Q53ET0 693 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TOR1AIP1Q5JTV8 583 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TTC19Q6DKK2 380 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TRIM40Q6P9F5 258 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZYG11AQ6WRX3 759 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OVCH1Q7RTY7 1134 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RAB43Q86YS6 212 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 KCT2Q8NC54 265 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SREK1Q8WXA9 508 aaKnown RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 GAL3ST3Q96A11 431 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CRELD1Q96HD1 420 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FAR2Q96K12 515 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MAGEB10Q96LZ2 347 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TMEM237Q96Q45 408 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CENPKQ9BS16 269 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ERVK-6Q9BXR3 956 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRORYQ9H606 182 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NOL11Q9H8H0 719 aaKnown RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 WDR54Q9H977 334 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 COPS7BQ9H9Q2 264 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SEMA4BQ9NPR2 832 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 C14orf105Q9NVL8 296 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 COPG2Q9UBF2 871 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TRPC4Q9UBN4 977 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ADGRE2Q9UHX3 823 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PTRH2Q9Y3E5 179 aaKnown RBP10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SLC22A7Q9Y694 548 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FRYQ5TBA9 3013 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PTPRQQ9UMZ3 2332 aa10.45□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 FOXS1O43638 330 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DLX3O60479 287 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PLIN3O60664 434 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 WFS1O76024 890 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 KLHL18O94889 574 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MED26O95402 600 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CLDN9O95484 217 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MLYCDO95822 493 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PROCP04070 461 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CAPN1P07384 714 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SBK3P0C264 359 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ALOX12P18054 663 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 WT1P19544 449 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CD22P20273 847 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PRKAA2P54646 552 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 NAA20P61599 178 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 RHDQ02161 417 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 PCDH1Q08174 1060 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ASPHQ12797 758 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DDX39BQ13838 428 aaKnown RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 E2F2Q14209 437 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 UGT8Q16880 541 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 CFAP157Q5JU67 520 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZNF678Q5SXM1 525 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 BEND6Q5SZJ8 279 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MFSD4BQ5TF39 518 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MRPL14Q6P1L8 145 aaKnown RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SH2D5Q6ZV89 423 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 COX15Q7KZN9 410 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 TMEM151AQ8N4L1 468 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ARHGEF39Q8N4T4 335 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 DTWD1Q8N5C7 304 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 BANPQ8N9N5 519 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OR9A4Q8NGU2 314 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 OR2Y1Q8NGV0 311 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 ZNF483Q8TF39 744 aaPredicted RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 SNRNP27Q8WVK2 155 aaKnown RBP10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MIEF2Q96C03 454 aa10.44□□□□□ -0.74
CSPG4P1Y-201ENST00000306641 MOCOSQ96EN8 888 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms