RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 C2orf78A6NCI8 922 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 SDHDO14521 159 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 TSPAN6O43657 245 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 RBBP4Q09028 425 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 SYT16Q17RD7 645 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 RNF130Q86XS8 419 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 PDSS2Q86YH6 399 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 AURKBQ96GD4 344 aaPredicted RBP15.42■□□□□ 0.06
USP42-201ENST00000306177 ITPAQ9BY32 194 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 EURLQ9NYK6 297 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 ACOX3O15254 700 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 ORC5O43913 435 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 C8orf89P0DMQ9 161 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 GJA5P36382 358 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 ARCN1P48444 511 aaKnown RBP15.42■□□□□ 0.06
USP42-201ENST00000306177 RAB6CQ53S08 254 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 GHDCQ8N2G8 530 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 FAM83CQ9BQN1 747 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 RAB6CQ9H0N0 254 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 C14orf105Q9NVL8 296 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 GSTT2BP0CG30 244 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 RASGEF1BQ0VAM2 473 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 DECR1Q16698 335 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 PROKR2Q8NFJ6 384 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 MND1Q9BWT6 205 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 KCNH6Q9H252 994 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 IFT46Q9NQC8 304 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 PCDHGA2Q9Y5H1 932 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 FKBP7Q9Y680 259 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 RBMXL2O75526 392 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 CYB5AP00167 134 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 PIM1P11309 404 aaPredicted RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 ACADVLP49748 655 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 TXNL4AP83876 142 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 MPP2Q14168 576 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ANKRD26P1Q6NSI1 321 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 REEP3Q6NUK4 255 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 NOXRED1Q6NXP6 359 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 QSOX2Q6ZRP7 698 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ERI1Q8IV48 349 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 PLA2G15Q8NCC3 412 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 OR8J3Q8NGG0 315 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 CLCC1Q96S66 551 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 CAPN14A8MX76 684 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 PCDHGA12O60330 932 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ITGA10O75578 1167 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 BMP8BP34820 402 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ARRB1P49407 418 aaPredicted RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 ZNF252P-AS1Q0IIN9 211 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 BMP8AQ7Z5Y6 402 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 TMEM126BQ8IUX1 230 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ZNF676Q8N7Q3 588 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 LMX1AQ8TE12 382 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 MEAF6Q9HAF1 191 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 MAFFQ9ULX9 164 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ZNF879B4DU55 563 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 LDB2O43679 373 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 DIRAS1O95057 198 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 PUS10Q3MIT2 529 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 LINGO2Q7L985 606 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 RASGRP3Q8IV61 690 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 CEP97Q8IW35 865 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 HCAR2Q8TDS4 363 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 ZFP3Q96NJ6 502 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 NSUN5Q96P11 429 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 RPF2Q9H7B2 306 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 MARK1Q9P0L2 795 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 LINGO3P0C6S8 592 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 SLC6A4P31645 630 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 RPS21P63220 83 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 LASP1Q14847 261 aaKnown RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 SIX1Q15475 284 aaPredicted RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 GFOD2Q3B7J2 385 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 NANOGP8Q6NSW7 305 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 OR2L5Q8NG80 312 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 P2RY13Q9BPV8 354 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 C17orf62Q9BQA9 187 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 BHLHE41Q9C0J9 482 aaPredicted RBP15.41■□□□□ 0.06
USP42-201ENST00000306177 NANOGQ9H9S0 305 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 LRRC42Q9Y546 428 aa15.41■□□□□ 0.06
USP42-201ENST00000306177 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
USP42-201ENST00000306177 ZNF726A6NNF4 738 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 H7BY64 318 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 INAVAQ3KP66 663 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 UNC50Q53HI1 259 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 PRRT3Q5FWE3 981 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 CDHR3Q6ZTQ4 885 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 SYVN1Q86TM6 617 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 RELTQ969Z4 430 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 PRAP1Q96NZ9 151 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 ACTL8Q9H568 366 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 ALKBH4Q9NXW9 302 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 TUBA8Q9NY65 449 aaPredicted RBP15.4■□□□□ 0.06
USP42-201ENST00000306177 MYH3P11055 1940 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 B4GALT2O60909 372 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 CDH15P55291 814 aa15.4■□□□□ 0.06
USP42-201ENST00000306177 MEF2AQ02078 507 aaPredicted RBP15.4■□□□□ 0.06
USP42-201ENST00000306177 ARHGAP40Q5TG30 622 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms