RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RAB31Q13636 194 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ZFP82Q8N141 532 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 AZIN2Q96A70 460 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■□□□□ 10.1
TRIM56-201ENST00000306085 PAQR5Q9NXK6 330 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 RNF215Q9Y6U7 377 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 SLC31A1O15431 190 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MATN1P21941 496 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.332e-6■■□□□ 12.6
TRIM56-201ENST00000306085 PIGZQ86VD9 579 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 PCDH7O60245 1069 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 SLC19A2O60779 497 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 APOA2P02652 100 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 IRF2P14316 349 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 GABRR2P28476 465 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 FIBCD1Q8N539 461 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 P2RY11Q96G91 374 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 YDJCA8MPS7 323 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 EEF1E1-BLOC1S5C9J1V9 151 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ANGPTL7O43827 346 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 IGFBP1P08833 259 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 NCS1P62166 190 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 DEFA6Q01524 100 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 SP2Q02086 613 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 NOMO2Q5JPE7 1267 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 FOXR2Q6PJQ5 311 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ZPBP2Q6X784 338 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MRPL15Q9P015 296 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ACSL5Q9ULC5 683 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 C2orf72A6NCS6 295 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CHATP28329 748 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 NR4A2P43354 598 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 RAB5CP51148 216 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 HSD11B2P80365 405 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CNTN2Q02246 1040 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 VASH1Q7L8A9 365 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CNTNAP3BQ96NU0 1288 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 RLIMQ9NVW2 624 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 GRXCR1A8MXD5 290 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 AGTR1P30556 359 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CARD17Q5XLA6 110 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 TRIM46Q7Z4K8 759 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 KIAA0319LQ8IZA0 1049 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM156Q8N614 296 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 PRELID2Q8N945 189 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 LRRC58Q96CX6 371 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 SCRN2Q96FV2 425 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CNOT11Q9UKZ1 510 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 CARNS1A5YM72 827 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 OR6C65A6NJZ3 312 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 H2AFB2P0C5Z0 115 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 DNASE1P24855 282 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 SEC23AQ15436 765 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 GSG1LQ6UXU4 331 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 IQCF1Q8N6M8 205 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 STYXQ8WUJ0 223 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 KLK6Q92876 244 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 C12orf65Q9H3J6 166 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 GLOD4Q9HC38 313 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 IL20RAQ9UHF4 553 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 FZD4Q9ULV1 537 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MAP2K7O14733 419 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 OPN1SWP03999 348 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 C8GP07360 202 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 S1PR1P21453 382 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 PSD4Q8NDX1 1056 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ST7LQ8TDW4 575 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 TMEM125Q96AQ2 219 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 LRRC3Q9BY71 257 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 NDRG2Q9UN36 371 aaKnown RBP13.01□□□□□ -0.33
TRIM56-201ENST00000306085 NME7Q9Y5B8 376 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 ST14Q9Y5Y6 855 aa13.01□□□□□ -0.33
TRIM56-201ENST00000306085 A6NLC8 198 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 NPBWR1P48145 328 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 RARRES1P49788 294 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ZNF404Q494X3 552 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 TSPAN33Q86UF1 283 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SLAMF9Q96A28 289 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ITM2CQ9NQX7 267 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 FAM234BA2RU67 622 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 OR2B3O76000 313 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 DIRAS3O95661 229 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ALPPL2P10696 532 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 SCNN1AP37088 669 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 TAS2R43P59537 309 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 MRPL49Q13405 166 aaKnown RBP13□□□□□ -0.33
TRIM56-201ENST00000306085 PARP15Q460N3 678 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ESPL1Q14674 2120 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ANKRD34BA5PLL1 514 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 AGPAT2O15120 278 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 FADDQ13158 208 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 FAM198BQ6UWH4 519 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 UNC93AQ86WB7 457 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 RPLP0P6Q8NHW5 317 aa13□□□□□ -0.33
TRIM56-201ENST00000306085 ANKHQ9HCJ1 492 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms