RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 THOC7Q6I9Y2 204 aaKnown RBP12.84□□□□□ -0.35
DDX54-201ENST00000306014 GDPD4Q6W3E5 623 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 HDDC2Q7Z4H3 204 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 SLC22A15Q8IZD6 547 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 TRIB2Q92519 343 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 APIPQ96GX9 242 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 KCTD7Q96MP8 289 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 UCK2Q9BZX2 261 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 TUBB1Q9H4B7 451 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ARNTLO00327 626 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 CCRL2O00421 344 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 PI15O43692 258 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 CD247P20963 164 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 VEGFBP49765 207 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ZNF140P52738 457 aaPredicted RBP12.84□□□□□ -0.35
DDX54-201ENST00000306014 MEF2AQ02078 507 aaPredicted RBP12.84□□□□□ -0.35
DDX54-201ENST00000306014 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.351e-6■□□□□ 10.6
DDX54-201ENST00000306014 EXOC3L2Q2M3D2 409 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 GALNT12Q8IXK2 581 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 SLC9A6Q92581 669 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
DDX54-201ENST00000306014 WASH4PA8MWX3 477 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 RFPL2O75678 378 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 OR5F1O95221 314 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 STK19P49842 368 aaPredicted RBP12.84□□□□□ -0.35
DDX54-201ENST00000306014 ARSIQ5FYB1 569 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 SMARCD3Q6STE5 483 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 SUSD1Q6UWL2 747 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 RAB8BQ92930 207 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 NEK6Q9HC98 313 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 MAT2BQ9NZL9 334 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 IL17CQ9P0M4 197 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ARFGEF1Q9Y6D6 1849 aa12.84□□□□□ -0.35
DDX54-201ENST00000306014 ISPDA4D126 451 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 MUSKO15146 869 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 CHST10O43529 356 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 KIAA0513O60268 411 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 UAP1L1Q3KQV9 507 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 PRSS48Q7RTY5 328 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 PGBD5Q8N414 524 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 LINC01465Q8N7H1 131 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 GTF2H4Q92759 462 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 ITPKCQ96DU7 683 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 ZBED6CLQ96FA7 236 aaPredicted RBP12.83□□□□□ -0.35
DDX54-201ENST00000306014 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 HEBP1Q9NRV9 189 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 DUS2Q9NX74 493 aaKnown RBP12.83□□□□□ -0.35
DDX54-201ENST00000306014 FBXW2Q9UKT8 454 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 DLGAP4Q9Y2H0 992 aa12.83□□□□□ -0.35
DDX54-201ENST00000306014 MYO9BQ13459 2157 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SLITRK5O94991 958 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SLC2A2P11168 524 aaPredicted RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 LAMP1P11279 417 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 TLX1P31314 330 aaPredicted RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 CCR4P51679 360 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 PTPRRQ15256 657 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SF1Q15637 639 aaKnown RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 SMN1Q16637 294 aaKnown RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 ATP13A5Q4VNC0 1218 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 MFSD4BQ5TF39 518 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 KIAA1161Q6NSJ0 714 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SYCE2Q6PIF2 218 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 GORASP2Q9H8Y8 452 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 TMEM30AQ9NV96 361 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 MCUBQ9NWR8 336 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 DKK3Q9UBP4 350 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SCN9AQ15858 1988 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 C2orf78A6NCI8 922 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 ORC5O43913 435 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 SAGP10523 405 aaPredicted RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 RTP2Q5QGT7 225 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 TSPAN33Q86UF1 283 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 RHBDF1Q96CC6 855 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 RNF38Q9H0F5 515 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 MED28Q9H204 178 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 E2F3O00716 465 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 APOL3O95236 402 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 BPIP17213 487 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 HTR1BP28222 390 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 RPL4P36578 427 aaKnown RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 ZNF630Q2M218 657 aaPredicted RBP12.83□□□□□ -0.36
DDX54-201ENST00000306014 ZNF181Q2M3W8 571 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 RUNDC3AQ59EK9 446 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 FAM219BQ5XKK7 198 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 NCEH1Q6PIU2 408 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 TBPL2Q6SJ96 375 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 Q6ZNX1 250 aa12.83□□□□□ -0.36
DDX54-201ENST00000306014 Q6ZSR9 355 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms