RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 CA5BQ9Y2D0 317 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PCDHB11Q9Y5F2 797 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 MTCH2Q9Y6C9 303 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 PIAS3Q9Y6X2 628 aa6.28□□□□□ -1.4
USP47-201ENST00000305481 GMNNO75496 209 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PGM3O95394 542 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 RPN2P04844 631 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TFAP2AP05549 437 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 NUDT7P0C024 238 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PTX3P26022 381 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 HSD17B2P37059 387 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TAS2R50P59544 299 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 MERTKQ12866 999 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SLC36A3Q495N2 470 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CYBRD1Q53TN4 286 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TMEM31Q5JXX7 168 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 GALNT10Q86SR1 603 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SLC9B2Q86UD5 537 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 C17orf64Q86WR6 236 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TDHQ8IZJ6 230 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ST13P4Q8IZP2 240 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 MAGEE2Q8TD90 523 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 STARD8Q92502 1023 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 NCLNQ969V3 563 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CIDECQ96AQ7 238 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 SLC47A1Q96FL8 570 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CAMK1GQ96NX5 476 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 BDH2Q9BUT1 245 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TRIM4Q9C037 500 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TPT1P8Q9HAU6 139 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 LHX9Q9NQ69 397 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PRDM8Q9NQV8 689 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 GPATCH2Q9NW75 528 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SH3BP4Q9P0V3 963 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PNMA8BQ9ULN7 279 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 GMEB1Q9Y692 573 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 EVPLLA8MZ36 301 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 C2CD4DB7Z1M9 353 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 H0Y8X5 98 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 RNASET2O00584 256 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 PLPP1O14494 284 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TPD52L2O43399 206 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 LCMT2O60294 686 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 EPN2O95208 641 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SNAP29O95721 258 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CLIC3O95833 236 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ZNF23P17027 643 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ACSL1P33121 698 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 HPCAL1P37235 193 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 RPS9P46781 194 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 MVDP53602 400 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CRYBA2P53672 197 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 HBA1P69905 142 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CYP4F2P78329 520 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ZNF852Q6ZMS4 543 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 FAM20CQ8IXL6 584 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ADGRF3Q8IZF5 1079 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SLC44A3Q8N4M1 653 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 OR2A1Q8NGT9 310 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ZFP90Q8TF47 636 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SMPDL3AQ92484 453 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SIPA1Q96FS4 1042 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 F2RL3Q96RI0 385 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ADI1Q9BV57 179 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 BHLHE41Q9C0J9 482 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 CAAP1Q9H8G2 361 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 RMI1Q9H9A7 625 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PELI2Q9HAT8 420 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PREBQ9HCU5 417 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PRM3Q9NNZ6 103 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 MYNNQ9NPC7 610 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TRPV5Q9NQA5 729 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 IMP3Q9NV31 184 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 SPATA7Q9P0W8 599 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 FZD4Q9ULV1 537 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 GPSM3Q9Y4H4 160 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 H3BQ06 376 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 RTCAO00442 366 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 TNFAIP8O95379 198 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 EML2O95834 649 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 IL1RNP18510 177 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 BSGP35613 385 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 CSNK1G2P78368 415 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 C2orf80Q0P641 193 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 APOFQ13790 326 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 VMACQ2NL98 169 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 OTUD3Q5T2D3 398 aaPredicted RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 ANXA8L1Q5VT79 327 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 KHDRBS2Q5VWX1 349 aaKnown RBP6.27□□□□□ -1.41
USP47-201ENST00000305481 CPZQ66K79 652 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 ANKRD34AQ69YU3 496 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 TMEM179BQ7Z7N9 219 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PLD3Q8IV08 490 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 HS3ST5Q8IZT8 346 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 KRT78Q8N1N4 520 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 PGBD3Q8N328 593 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 SYNPOQ8N3V7 929 aa6.27□□□□□ -1.41
USP47-201ENST00000305481 UBE2E3Q969T4 207 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms