RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ANGPT1Q15389 498 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SPHARQ15513 63 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 NLGN4XQ8N0W4 816 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 OR9Q2Q8NGE9 314 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 OR10T2Q8NGX3 314 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 CCDC120Q96HB5 630 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 C1orf74Q96LT6 269 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 FAM129BQ96TA1 746 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ZFYVE1Q9HBF4 777 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 MIEF1Q9NQG6 463 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 FLRT1Q9NZU1 646 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC30A4O14863 429 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 TACR1P25103 407 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC9A3P48764 834 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 PLEKHM3Q6ZWE6 761 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SCD5Q86SK9 330 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC7A6Q92536 515 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 MSANTD3Q96H12 275 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 PKP4Q99569 1192 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 WACQ9BTA9 647 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 GON7Q9BXV9 100 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ACTL8Q9H568 366 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SERHLQ9NQF3 203 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 H2AFY2Q9P0M6 372 aaPredicted RBP12.6□□□□□ -0.39
TRIM35-201ENST00000305364 PCDHGB2Q9Y5G2 931 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
TRIM35-201ENST00000305364 TLR4O00206 839 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 PLD2O14939 933 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 MUSKO15146 869 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 IFNW1P05000 195 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC10A3P09131 477 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 AKR1A1P14550 325 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 NNMTP40261 264 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC19A1P41440 591 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 BICRALQ6AI39 1079 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 C22orf42Q6IC83 251 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ASB18Q6ZVZ8 466 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ISG20Q96AZ6 181 aaKnown RBP12.6□□□□□ -0.39
TRIM35-201ENST00000305364 HRASLS5Q96KN8 279 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 KCTD7Q96MP8 289 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ADAM2Q99965 735 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 TEX12Q9BXU0 123 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 SLC32A1Q9H598 525 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 PCDHGA6Q9Y5G7 932 aa12.6□□□□□ -0.39
TRIM35-201ENST00000305364 ARHGAP33O14559 1287 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 DHFRP00374 187 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 EPORP19235 508 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 SUOXP51687 545 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 GCNT6Q5T4J0 391 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 NOXRED1Q6NXP6 359 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 TRIM40Q6P9F5 258 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 MDGA1Q8NFP4 955 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 DOHHQ9BU89 302 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 MAGEH1Q9H213 219 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 DNMT3BQ9UBC3 853 aaKnown RBP12.59□□□□□ -0.39
TRIM35-201ENST00000305364 STOML2Q9UJZ1 356 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 SLC22A14Q9Y267 594 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ITM2BQ9Y287 266 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ARID2Q68CP9 1835 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 MMP2P08253 660 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 OR56A5P0C7T3 313 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 P2RX3P56373 397 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 BCL2L1Q07817 233 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 PTPRRQ15256 657 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 HKDC1Q2TB90 917 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 UBXN11Q5T124 520 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ANXA8L1Q5VT79 327 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 FAAH2Q6GMR7 532 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 SIGIRRQ6IA17 410 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 LAIR2Q6ISS4 152 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 MZT2AQ6P582 158 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 DENND6BQ8NEG7 585 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.399e-7■■■■■ 38.6
TRIM35-201ENST00000305364 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 SLC52A3Q9NQ40 469 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 DNAJC11Q9NVH1 559 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ANGPT4Q9Y264 503 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 M0R082 166 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 CAPN5O15484 640 aaPredicted RBP12.59□□□□□ -0.39
TRIM35-201ENST00000305364 PTX3P26022 381 aaPredicted RBP12.59□□□□□ -0.39
TRIM35-201ENST00000305364 TGFBR2P37173 567 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 NRIP1P48552 1158 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 RNASE12Q5GAN4 147 aaKnown RBP12.59□□□□□ -0.39
TRIM35-201ENST00000305364 FRG2Q64ET8 278 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
TRIM35-201ENST00000305364 FRG2BQ96QU4 278 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 TBC1D17Q9HA65 648 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 SLC6A13Q9NSD5 602 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 HCN4Q9Y3Q4 1203 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
TRIM35-201ENST00000305364 ISM1B1AKI9 464 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 HHLA1C9JL84 531 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 APOL3O95236 402 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 CSTF2P33240 577 aaKnown RBP eCLIP12.58□□□□□ -0.39
TRIM35-201ENST00000305364 KCNQ1P51787 676 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 ABATP80404 500 aa12.58□□□□□ -0.39
TRIM35-201ENST00000305364 MRPS6P82932 125 aaKnown RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms