RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 EXO5Q9H790 373 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 RIMKLBQ9ULI2 386 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 FADS2P1A8MWK0 482 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 C2CD4DB7Z1M9 353 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 TNFRSF11BO00300 401 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 UGT2B17O75795 530 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 BMP7P18075 431 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ACTR3P61158 418 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 CSTF1Q05048 431 aaKnown RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 TYSND1Q2T9J0 566 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 LIPJQ5W064 366 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 NANOGP8Q6NSW7 305 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 CGB2Q6NT52 195 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 AAGABQ6PD74 315 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF730Q6ZMV8 503 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 Q6ZNB5 142 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 Q6ZS52 159 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF551Q7Z340 670 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 RNF130Q86XS8 419 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 CNTN4Q8IWV2 1026 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF707Q96C28 371 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 NANOGQ9H9S0 305 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 SUCOQ9UBS9 1254 aaKnown RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 MKL2Q9ULH7 1088 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 SIT1Q9Y3P8 196 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 SPAG17Q6Q759 2223 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 C2orf74A8MZ97 194 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 NPC1O15118 1278 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 HOXC11O43248 304 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 PFDN1O60925 122 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 PRKACGP22612 351 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 OR1E2P47887 323 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF267Q14586 743 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 DPY19L1Q2PZI1 675 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 TTLL10Q6ZVT0 673 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 CLVS1Q8IUQ0 354 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 BIRC8Q96P09 236 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 COQ10BQ9H8M1 238 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 HCN3Q9P1Z3 774 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF282Q9UDV7 671 aaPredicted RBP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 SVILO95425 2214 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 MC1RQ01726 317 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.8□□□□□ -0.84
GABRB3-201ENST00000299267 DEPDC1Q5TB30 811 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 TTC23Q5W5X9 447 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 NFKBIDQ8NI38 313 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 POLR1BQ9H9Y6 1135 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 NCDNQ9UBB6 729 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 RHCGQ9UBD6 479 aa9.8□□□□□ -0.84
GABRB3-201ENST00000299267 PRSS38A1L453 326 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 PRAMEF26H0Y7S4 382 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 PSMD11O00231 422 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 CAPN5O15484 640 aaPredicted RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 SLC25A12O75746 678 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 HIST1H2ABP04908 130 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 FABP3P05413 133 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 RPS3P23396 243 aaKnown RBP eCLIP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 MASP1P48740 699 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 SUOXP51687 545 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 NKX3-2P78367 333 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 GSTM4Q03013 218 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 SCARB2Q14108 478 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 LARS2Q15031 903 aaKnown RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 KIAA1211LQ6NV74 962 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 FIGLAQ6QHK4 219 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 HIST3H2AQ7L7L0 130 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ZSWIM9Q86XI8 627 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ASB11Q8WXH4 323 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 HIST1H2ACQ93077 130 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 UBXN10Q96LJ8 280 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 NELL2Q99435 816 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 CCDC106Q9BWC9 280 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 PHF7Q9BWX1 381 aaPredicted RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 KCNH6Q9H252 994 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 CUEDC1Q9NWM3 386 aaPredicted RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 TRPS1Q9UHF7 1281 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 CACNA1HO95180 2353 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 LOC100506127A0A0U1RQW1 187 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ARHGEF15O94989 841 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 LAMP1P11279 417 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 IFNGR2P38484 337 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 CTSKP43235 329 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 RABIFP47224 123 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 TPMTP51580 245 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 AQP4P55087 323 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ADARP55265 1226 aaKnown RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 MLF2Q15773 248 aaPredicted RBP9.79□□□□□ -0.84
GABRB3-201ENST00000299267 DUOXA1Q1HG43 343 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 FAM219BQ5XKK7 198 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ERICH5Q6P6B1 374 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 GPR65Q8IYL9 337 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ZNF540Q8NDQ6 660 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 OR52E1Q8NGJ3 308 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 TADA1Q96BN2 335 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 MVB12BQ9H7P6 319 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 ALKBH4Q9NXW9 302 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 PDP2Q9P2J9 529 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 SNTNA6NMZ2 147 aa9.79□□□□□ -0.84
GABRB3-201ENST00000299267 H3BNH8 94 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms