RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 MAP4K5Q9Y4K4 846 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 LYVE1Q9Y5Y7 322 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 LEFTY2O00292 366 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 CD40LGP29965 261 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 HBA1P69905 142 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 SPIBQ01892 262 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 TIGD6Q17RP2 521 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 ERICH5Q6P6B1 374 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 PLEKHG7Q6ZR37 379 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 NPAS3Q8IXF0 933 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM83FQ8NEG4 500 aaPredicted RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 MCCC1Q96RQ3 725 aaPredicted RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 ITPAQ9BY32 194 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 SPATA6Q9NWH7 488 aaPredicted RBP23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 UNC80Q8N2C7 3258 aa23.48■■□□□ 1.35
SPTSSA-201ENST00000298130 RFPL2O75678 378 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 IDSP22304 550 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 PPIGQ13427 754 aaKnown RBP eCLIP23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 SYTL3Q4VX76 610 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 MMP21Q8N119 569 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 CLIP4Q8N3C7 705 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 C2orf73Q8N5S3 287 aaPredicted RBP23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 OR7G3Q8NG95 312 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 GGHQ92820 318 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 TCF25Q9BQ70 676 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 HMX1Q9NP08 348 aaPredicted RBP23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 ADPRHL2Q9NX46 363 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 C1orf226A1L170 272 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM227AF5H4B4 570 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 MYO1DO94832 1006 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 C6orf47O95873 294 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 OLFM2O95897 454 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 OR10G2Q8NGC3 310 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 NFKBIDQ8NI38 313 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 ASZ1Q8WWH4 475 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 NEIL2Q969S2 332 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 HRASLS5Q96KN8 279 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 OSGIN1Q9UJX0 560 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 ERVW-1Q9UQF0 538 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 HSPE1-MOB4S4R3N1 261 aa23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 GOLGA4Q13439 2230 aaKnown RBP23.47■■□□□ 1.35
SPTSSA-201ENST00000298130 TGFB1P01137 390 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 URODP06132 367 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 EXOC3L2Q2M3D2 409 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 CACTIN-AS1Q8N1I8 211 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 PHF10Q8WUB8 498 aaKnown RBP23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 TBC1D20Q96BZ9 403 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 DOHHQ9BU89 302 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 SCHIP1Q9P0W5 487 aaPredicted RBP23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 LATS1O95835 1130 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 MPC1LP0DKB6 136 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 RAB33AQ14088 237 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 PLEKHS1Q5SXH7 462 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 SLC38A4Q969I6 547 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 PKP4Q99569 1192 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 CHCHD6Q9BRQ6 235 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 SLC46A2Q9BY10 475 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 CHST8Q9H2A9 424 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 OR51B5Q9H339 312 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 HCFC1R1Q9NWW0 138 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 ITM2BQ9Y287 266 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 MICAL3Q7RTP6 2002 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 TLL1O43897 1013 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 PTHP01270 115 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 AP1S2P56377 157 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 RPS3AP61247 264 aaKnown RBP23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 CDKL4Q5MAI5 379 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 LIPJQ5W064 366 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 FAM217AQ8IXS0 508 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 CLP1Q92989 425 aaKnown RBP23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 ABHD8Q96I13 439 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 Q96MT0 163 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 TSEN34Q9BSV6 310 aaKnown RBP23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 PCDHGB3Q9Y5G1 929 aa23.46■■□□□ 1.35
SPTSSA-201ENST00000298130 ADRA2AP08913 450 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 IMPA1P29218 277 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 HTR3DQ70Z44 454 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 RAVER1Q8IY67 606 aaKnown RBP23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 RHOXF1Q8NHV9 184 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 SIGLEC11Q96RL6 698 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 PITX2Q99697 317 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 NRTNQ99748 197 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 CORO1BQ9BR76 489 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 CCNB1IP1Q9NPC3 277 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 QPCTLQ9NXS2 382 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 PCDH17O14917 1159 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 CSTF3Q12996 717 aaKnown RBP23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 SYTL1Q8IYJ3 562 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 RASGEF1AQ8N9B8 481 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 TMEM159Q96B96 161 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 FCRL1Q96LA6 429 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 CENPOQ9BU64 300 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 SORBS1Q9BX66 1292 aaKnown RBP23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 GIN1Q9NXP7 522 aa23.45■■□□□ 1.34
SPTSSA-201ENST00000298130 NINQ8N4C6 2090 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 LEFTY1O75610 366 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 POP4O95707 220 aaKnown RBP23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 TPTEP56180 551 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 VEZF1Q14119 521 aa23.44■■□□□ 1.34
SPTSSA-201ENST00000298130 ARSIQ5FYB1 569 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms