RNA–Protein interactions for RNA: ENST00000295550.8

COL6A3-201, Transcript of collagen type VI alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A3, Length 10,749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-201ENST00000295550 ZBED6CLQ96FA7 236 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-201ENST00000295550 SLC35G5Q96KT7 338 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 SMOC2Q9H3U7 446 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 TMEM184CQ9NVA4 438 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ZIM2Q9NZV7 527 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 HCN2Q9UL51 889 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 SLC27A5Q9Y2P5 690 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 BORCS7-ASMTA0A0B4J1R7 106 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ELOA3DA6NLF2 546 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-201ENST00000295550 JAG1P78504 1218 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ELOA3BQ3SY89 546 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF598Q86UK7 904 aaKnown RBP9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ELOA3Q8NG57 546 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 EMID1Q96A84 441 aaPredicted RBP9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF599Q96NL3 588 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 NANSQ9NR45 359 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 RHDQ02161 417 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ARHGAP1Q07960 439 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 TAF10Q12962 218 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 COMMD7Q86VX2 200 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ACBD4Q8NC06 268 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 AUTS2Q8WXX7 1259 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 TTYH2Q9BSA4 534 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 PRORSD1PA6NEY8 169 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 CDRT1O95170 752 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 ATP4BP51164 291 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 COL28A1Q2UY09 1125 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 FBXO48Q5FWF7 155 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 DCDC5Q6ZRR9 648 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 SAMD12Q8N8I0 201 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 SIDT2Q8NBJ9 832 aaKnown RBP9.58□□□□□ -0.88
COL6A3-201ENST00000295550 OR8S1Q8NH09 359 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 RTP4Q96DX8 246 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 KIF26BQ2KJY2 2108 aa9.58□□□□□ -0.88
COL6A3-201ENST00000295550 A0A1W2PRQ8 180 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 CLDN4O14493 209 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 RAB36O95755 333 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 PIK3CBP42338 1070 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 PDE12Q6L8Q7 609 aaKnown RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 METTL25Q8N6Q8 603 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TMEM68Q96MH6 324 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 HBEGFQ99075 208 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 NELFAQ9H3P2 528 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF282Q9UDV7 671 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 LATS1O95835 1130 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 HCKP08631 526 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ITGA5P08648 1049 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SYPL2Q5VXT5 272 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF773Q6PK81 442 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 LDB1Q86U70 411 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 KIF18BQ86Y91 864 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SHKBP1Q8TBC3 707 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 PHOX2BQ99453 314 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ERVK-19Q9WJR5 959 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 MYBPHLA2RUH7 354 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OR1F1O43749 312 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF16P17020 682 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 BRCC3P46736 316 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SMSP52788 366 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 CAV3P56539 151 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 CREB5Q02930 508 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 GPR135Q8IZ08 494 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 RGL4Q8IZJ4 473 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OR6K2Q8NGY2 324 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TM9SF2Q99805 663 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TAPBPLQ9BX59 468 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 XYLT2Q9H1B5 865 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TMEM9Q9P0T7 183 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 A0A1B0GVM2 712 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 FFAR2O15552 330 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SNNO75324 88 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 CLCN4P51793 760 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 LUMP51884 338 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF423Q2M1K9 1284 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 DPY19L1Q2PZI1 675 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 C2CD4AQ8NCU7 369 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 PHC3Q8NDX5 983 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 C2orf15Q8WU43 125 aaKnown RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TMBIM1Q969X1 311 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 AURKBQ96GD4 344 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 EIF5A2Q9GZV4 153 aaKnown RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ERMP1Q7Z2K6 904 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OR8D1Q8WZ84 308 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 CCL22O00626 93 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 IRAK2O43187 625 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 B3GALT2O43825 422 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 HSPA7P48741 367 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TGFBIQ15582 683 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 LGI4Q8N135 537 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 FCAMRQ8WWV6 532 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OSTF1Q92882 214 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 RBM18Q96H35 190 aaKnown RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 C14orf105Q9NVL8 296 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 SNX10Q9Y5X0 201 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 TRIM64BA6NI03 449 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OR2T5Q6IEZ7 315 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 OR2T29Q8NH02 315 aa9.57□□□□□ -0.88
COL6A3-201ENST00000295550 ZNF420Q8TAQ5 688 aaPredicted RBP9.57□□□□□ -0.88
COL6A3-201ENST00000295550 KLHL6Q8WZ60 621 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms