RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 HERC3Q15034 1050 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 PFKFB4Q16877 469 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 TSNAXIP1Q2TAA8 658 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 ADGRD1Q6QNK2 874 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 TMIGD1Q6UXZ0 262 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 UBTD2Q8WUN7 234 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 CCT6BQ92526 530 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 MTBPQ96DY7 904 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 EPB41L4BQ9H329 900 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 PRM3Q9NNZ6 103 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 HCN3Q9P1Z3 774 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 NAALAD2Q9Y3Q0 740 aa23.84■■□□□ 1.41
PDF-201ENST00000288022 PCSK5Q92824 1860 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 K7EPI3 171 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 KLHL18O94889 574 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 RBP1P09455 135 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 COL6A2P12110 1019 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 HNF4AP41235 474 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 IRF8Q02556 426 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 LACTB2Q53H82 288 aaPredicted RBP23.83■■□□□ 1.41
PDF-201ENST00000288022 TECRLQ5HYJ1 363 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 ABHD13Q7L211 337 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.83■■□□□ 1.41
PDF-201ENST00000288022 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.83■■□□□ 1.41
PDF-201ENST00000288022 NACC2Q96BF6 587 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 PTCD3Q96EY7 689 aaKnown RBP23.83■■□□□ 1.41
PDF-201ENST00000288022 EHD1Q9H4M9 534 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 TP53TG5Q9Y2B4 290 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 ANGPTL3Q9Y5C1 460 aa23.83■■□□□ 1.41
PDF-201ENST00000288022 IQANK1A0A1B0GTG1 560 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 URADA6NGE7 173 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 ZNF860A6NHJ4 632 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 A6NL46 340 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 AGPSO00116 658 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 RDH16O75452 317 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 ZNF888P0CJ79 500 aaPredicted RBP23.82■■□□□ 1.4
PDF-201ENST00000288022 ALOX12P18054 663 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 ALDH18A1P54886 795 aaKnown RBP23.82■■□□□ 1.4
PDF-201ENST00000288022 SKP1P63208 163 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 CHIT1Q13231 466 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 DOC2AQ14183 400 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 SETDB1Q15047 1291 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 MFSD4BQ5TF39 518 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 LAPTM4BQ86VI4 370 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 PDSS2Q86YH6 399 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 CLEC1AQ8NC01 280 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 TTLQ8NG68 377 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 VPS50Q96JG6 964 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 EFCAB11Q9BUY7 163 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 SLC25A23Q9BV35 468 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 PITHD1Q9GZP4 211 aaPredicted RBP23.82■■□□□ 1.4
PDF-201ENST00000288022 PSMC3IPQ9P2W1 217 aaPredicted RBP23.82■■□□□ 1.4
PDF-201ENST00000288022 G3BP2Q9UN86 482 aaKnown RBP23.82■■□□□ 1.4
PDF-201ENST00000288022 HS3ST3B1Q9Y662 390 aa23.82■■□□□ 1.4
PDF-201ENST00000288022 IDSB3KWA1 339 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 HEXBP07686 556 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 EPB42P16452 691 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 EMP2P54851 167 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 LAPTM5Q13571 262 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 HIST2H2ACQ16777 129 aaPredicted RBP23.81■■□□□ 1.4
PDF-201ENST00000288022 DEFB134Q4QY38 66 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 PAGE2BQ5JRK9 111 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 TOR1AIP1Q5JTV8 583 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 DCAF10Q5QP82 559 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 HIST2H2AA3Q6FI13 130 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 ZC3H7AQ8IWR0 971 aaKnown RBP23.81■■□□□ 1.4
PDF-201ENST00000288022 TEX9Q8N6V9 391 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 OR51Q1Q8NH59 317 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 TGIF2Q9GZN2 237 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 NT5DC2Q9H857 520 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 XPR1Q9UBH6 696 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 FETUBQ9UGM5 382 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 TBK1Q9UHD2 729 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 FBXL4Q9UKA2 621 aa23.81■■□□□ 1.4
PDF-201ENST00000288022 HEMK1Q9Y5R4 338 aaPredicted RBP23.81■■□□□ 1.4
PDF-201ENST00000288022 ANKDD1BA6NHY2 528 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 SOCS6O14544 535 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 PRAMEF4O60810 478 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 SERPINA6P08185 405 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 EPORP19235 508 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 NR1D1P20393 614 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 XCR1P46094 333 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 RAB8AP61006 207 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 PRAMEF9Q5VWM5 478 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 FAAH2Q6GMR7 532 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 TCTN3Q6NUS6 607 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 KIRREL2Q6UWL6 708 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 TIFABQ6ZNK6 161 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 PTRH1Q86Y79 214 aaKnown RBP23.8■■□□□ 1.4
PDF-201ENST00000288022 UTP15Q8TED0 518 aaKnown RBP23.8■■□□□ 1.4
PDF-201ENST00000288022 CREB3L4Q8TEY5 395 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 WDR34Q96EX3 536 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 SLC6A16Q9GZN6 736 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 MKL2Q9ULH7 1088 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 PIEZO2Q9H5I5 2752 aa23.8■■□□□ 1.4
PDF-201ENST00000288022 ATRXP46100 2492 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 B8ZZF3 427 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 MASP2O00187 686 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 KLK8O60259 260 aa23.79■■□□□ 1.4
PDF-201ENST00000288022 GALR3O60755 368 aaPredicted RBP23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms