RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 FEN1P39748 380 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 RPS26P62854 115 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 HHEXQ03014 270 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TPRG1LQ5T0D9 272 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TNFAIP8L2Q6P589 184 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ITCHQ96J02 903 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 MSLNLQ96KJ4 702 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 COQ10AQ96MF6 247 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 APOL4Q9BPW4 351 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 USE1Q9NZ43 259 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 EBF1Q9UH73 591 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 BBIP1A8MTZ0 92 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 A8MUA0 341 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 GFRA2O00451 464 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 VEGFDO43915 354 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ITGAXP20702 1163 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 PEX2P28328 305 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TRPC1P48995 793 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 MANFP55145 182 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 MRPS21P82921 87 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TRIM25Q14258 630 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 INTS11Q5TA45 600 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 CPTPQ5TA50 214 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 APLFQ8IW19 511 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 C8orf59Q8N0T1 100 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 FAM47BQ8NA70 645 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ADCY4Q8NFM4 1077 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SETD7Q8WTS6 366 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 RORBQ92753 470 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 RERGQ96A58 199 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC7A6OSQ96CW6 309 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 MPP4Q96JB8 637 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 LYSMD1Q96S90 227 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ALG2Q9H553 416 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 USP22Q9UPT9 525 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SAMHD1Q9Y3Z3 626 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 PLXNA3P51805 1871 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 KRBA1A5PL33 1030 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 IFNA16P05015 189 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 OCM2P0CE71 109 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 OCMP0CE72 109 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 HOXB3P14651 431 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC26A3P40879 764 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 CENPAP49450 140 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ERVK-8P63133 956 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 HSF5Q4G112 596 aaPredicted RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TTC23Q5W5X9 447 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 ZNF438Q7Z4V0 828 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 TMEM151AQ8N4L1 468 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 OR7G3Q8NG95 312 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 OR8K5Q8NH50 307 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SNRNP27Q8WVK2 155 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 NELL1Q92832 810 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SPHK1Q9NYA1 384 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 C3orf18Q9UK00 162 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 SH2B3Q9UQQ2 575 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 AP3M1Q9Y2T2 418 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 USP34Q70CQ2 3546 aa8.69□□□□□ -1.02
CCDC144B-201ENST00000285176 STX16O14662 325 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 AP2A2O94973 939 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 RPS17P08708 135 aaKnown RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 RPS3P23396 243 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 ADSLP30566 484 aaPredicted RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 VSX2P58304 361 aaPredicted RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 DNAJB13P59910 316 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 BTN3A2P78410 334 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 TAP2Q03519 686 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 GSTA3Q16772 222 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 KIAA1161Q6NSJ0 714 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 SHISA6Q6ZSJ9 500 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 ZBTB46Q86UZ6 589 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 AMIGO1Q86WK6 493 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 NRSN1Q8IZ57 195 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 CLECL1Q8IZS7 167 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 OR2L2Q8NH16 312 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 FAM110BQ8TC76 370 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 SLC13A3Q8WWT9 602 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 SMPDL3AQ92484 453 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 PPCDCQ96CD2 204 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 REXO5Q96IC2 774 aaKnown RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 CAMK1GQ96NX5 476 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 ZNF382Q96SR6 550 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 POPDC3Q9HBV1 291 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 RIMKLBQ9ULI2 386 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 EML2O95834 649 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 BCKDHAP12694 445 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 UQCRBP14927 111 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 TCEA1P23193 301 aaKnown RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 MAGEA12P43365 314 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 HNMTP50135 292 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 GSTM4Q03013 218 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 NNATQ16517 81 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 PAGE2Q7Z2X7 111 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 SETD9Q8NE22 299 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 HDAC8Q9BY41 377 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 ACPTQ9BZG2 426 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 REXO4Q9GZR2 422 aaKnown RBP8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 LTB4R2Q9NPC1 389 aa8.68□□□□□ -1.02
CCDC144B-201ENST00000285176 ITM2CQ9NQX7 267 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms