RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SH3BGRLO75368 114 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 RASSF9O75901 435 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CPNE6O95741 557 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 ESRRAP11474 423 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 PIK3R1P27986 724 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 RPL38P63173 70 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 TBL3Q12788 808 aaKnown RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 MAD2L1Q13257 205 aaPredicted RBP18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 SQLEQ14534 574 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CACHD1Q5VU97 1274 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 VN1R4Q7Z5H5 301 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 NAXDQ8IW45 347 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 SLC13A3Q8WWT9 602 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 APIPQ96GX9 242 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 NUDT22Q9BRQ3 303 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 CHRNA10Q9GZZ6 450 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 FAM60AQ9NP50 221 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 TMEM9Q9P0T7 183 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 TMED5Q9Y3A6 229 aa18.07■□□□□ 0.48
PDLIM3-202ENST00000284770 COL5A1P20908 1838 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 OTOGLQ3ZCN5 2332 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 PROB1E7EW31 1015 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 HNRNPCL1O60812 293 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 ZBTB11O95625 1053 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 SERPIND1P05546 499 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 GP1BAP07359 652 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 PRDX6P30041 224 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 ACTN3Q08043 901 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 DEPDC1Q5TB30 811 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 KHDRBS2Q5VWX1 349 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 CHTF18Q8WVB6 975 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 TM4SF19Q96DZ7 209 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 C11orf24Q96F05 449 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 DPYSL5Q9BPU6 564 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 C1orf50Q9BV19 199 aa18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 MRPL1Q9BYD6 325 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 NOP53Q9NZM5 478 aaKnown RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 ATXN7L1Q9ULK2 861 aaPredicted RBP18.06■□□□□ 0.48
PDLIM3-202ENST00000284770 ASXL3Q9C0F0 2248 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 LRIT2A6NDA9 550 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 NDUFS4O43181 175 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 CBFA2T3O75081 653 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 DIO3P55073 304 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 ACSM2AQ08AH3 577 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 PWP1Q13610 501 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 CLPPQ16740 277 aaPredicted RBP18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 SPIN4Q56A73 249 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 ZC3H12BQ5HYM0 836 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 ACSM2BQ68CK6 577 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 FRMPD2BQ6IN97 320 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 PRSS42Q7Z5A4 293 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 ASPGQ86U10 573 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 PARP9Q8IXQ6 854 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 DNAJC22Q8N4W6 341 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 POU5F2Q8N7G0 328 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 CMTM5Q96DZ9 223 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 LRMDAQ9H2I8 198 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 RRP15Q9Y3B9 282 aaKnown RBP18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 RP1P56715 2156 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 MUC6Q6W4X9 2439 aa18.05■□□□□ 0.48
PDLIM3-202ENST00000284770 LOC105369274A0A096LPK9 316 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 LOC102723532A0A0G2JNH3 316 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 TOX3O15405 576 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 MAP3K7O43318 606 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 DNAJC8O75937 253 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SEMA3DO95025 777 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 IDO1P14902 403 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 MRPL19P49406 292 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 CORO7P57737 925 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 IRX1P78414 480 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 HYAL2Q12891 473 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 GSTA3Q16772 222 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 ADPRMQ3LIE5 342 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 IL23RQ5VWK5 629 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 ZNF574Q6ZN55 896 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 TMPRSS9Q7Z410 1059 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 OR4N4Q8N0Y3 316 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 OR4D9Q8NGE8 314 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 RERGQ96A58 199 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 F2RL3Q96RI0 385 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 MACROD1Q9BQ69 325 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 CENPKQ9BS16 269 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 REXO4Q9GZR2 422 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 PDE7BQ9NP56 450 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SDR39U1Q9NRG7 319 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 AIG1Q9NVV5 245 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 ASIC5Q9NY37 505 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 PDP2Q9P2J9 529 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 EIF3LQ9Y262 564 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 HCN4Q9Y3Q4 1203 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 GPR45Q9Y5Y3 372 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 H0YGG7 62 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 SAP18O00422 153 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 COX4I1P13073 169 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 ACPPP15309 386 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 GPX3P22352 226 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 HNRNPH1P31943 449 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 CPA2P48052 419 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 RASSF2P50749 326 aa18.04■□□□□ 0.48
PDLIM3-202ENST00000284770 ARF3P61204 181 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms