RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FCER2P06734 321 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 BDKRB1P46663 353 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 XKR4Q5GH76 650 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 QSOX2Q6ZRP7 698 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 OR2L3Q8NG85 312 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 FBXO27Q8NI29 283 aa15.96■□□□□ 0.14
SH3RF1-201ENST00000284637 FXYD6-FXYD2A0A087WZ82 144 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM170BA6NMN3 283 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 OR2AT4A6NND4 320 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 BHMG1C9JSJ3 638 aaPredicted RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 LDB2O43679 373 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 HK1P19367 917 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 OR12D2P58182 307 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ALKBH2Q6NS38 261 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FUZQ9BT04 418 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 CCDC32Q9BV29 185 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FXYD6Q9H0Q3 95 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 OR51B5Q9H339 312 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 SMOC2Q9H3U7 446 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 SRMSQ9H3Y6 488 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 DPEP2Q9H4A9 486 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PRSS51A0A1B0GVH4 220 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM72CH0Y354 149 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 AQP9O43315 295 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 GSTM3P21266 225 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ILF3Q12906 894 aaKnown RBP eCLIP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PIGGQ5H8A4 983 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM72AQ5TYM5 149 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM72DQ6L9T8 149 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM72BQ86X60 149 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 SH3YL1Q96HL8 342 aaPredicted RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 HYLS1Q96M11 299 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 CFAP20Q9Y6A4 193 aaKnown RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 SOCS2O14508 198 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 WNT9AO14904 365 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 B3GALT2O43825 422 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 RPP14O95059 124 aaKnown RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 HPRP00739 348 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 EBLN1P0CF75 366 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 BMP2P12643 396 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF823P16415 610 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 CDH11P55287 796 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PUM1Q14671 1186 aaKnown RBP eCLIP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 TOR1AIP1Q5JTV8 583 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PRAMEF14Q5SWL7 426 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PRAMEF13Q5VWM6 474 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 NPLQ9BXD5 320 aaPredicted RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 B3GNT4Q9C0J1 378 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ARMC1Q9NVT9 282 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ERVW-1Q9UQF0 538 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 MYH7BA7E2Y1 1941 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 DFNA5O60443 496 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ENTPD6O75354 484 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 EOMESO95936 686 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 CCR8P51685 355 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 TAS2R50P59544 299 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PITX1P78337 314 aaPredicted RBP15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 PNCKQ6P2M8 343 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 NPAS3Q8IXF0 933 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 SPERTQ8NA61 448 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 DEDD2Q8WXF8 326 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 C12orf42Q96LP6 360 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 ERVK-18Q9QC07 812 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 HCN2Q9UL51 889 aa15.95■□□□□ 0.14
SH3RF1-201ENST00000284637 DUXAA6NLW8 204 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 J3QLW9 94 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF19P17023 458 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ACADLP28330 430 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ATP4BP51164 291 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ARSIQ5FYB1 569 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 FAM120CQ9NX05 1096 aaKnown RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MS4A12Q9NXJ0 267 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF639Q9UID6 485 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ERI3O43414 337 aaKnown RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 FGF19O95750 216 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ANXA3P12429 323 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 FOSL2P15408 326 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 NPR2P20594 1047 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 PIK3CBP42338 1070 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ST3GAL4Q11206 333 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 PRAMEF17Q5VTA0 474 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MTMR14Q8NCE2 650 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 OR4K1Q8NGD4 311 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 COQ8BQ96D53 544 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MKKSQ9NPJ1 570 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MOCS1Q9NZB8 636 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 PCDHGB7Q9Y5F8 929 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ABCC6O95255 1503 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SLIT2O94813 1529 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 NPPAP01160 153 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 IVDP26440 423 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 MAP2K3P46734 347 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ATAT1Q5SQI0 421 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 HSDL2Q6YN16 418 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ZNF782Q6ZMW2 699 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 OTOP2Q7RTS6 562 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 WDTC1Q8N5D0 677 aa15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 ELOA3DA6NLF2 546 aaPredicted RBP15.94■□□□□ 0.14
SH3RF1-201ENST00000284637 SMAD9O15198 467 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms