RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 C6orf47O95873 294 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 IDSP22304 550 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 AK4P27144 223 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-201ENST00000279247 CRATP43155 626 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 CLCA4Q14CN2 919 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 MLF2Q15773 248 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-201ENST00000279247 IL3P08700 152 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ACSL1P33121 698 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 FXNQ16595 210 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 LINC01555Q8NAE3 123 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 VPS37AQ8NEZ2 397 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 C11orf24Q96F05 449 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-201ENST00000279247 GORASP2Q9H8Y8 452 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 FGF22Q9HCT0 170 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 FZD4Q9ULV1 537 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 SNX8Q9Y5X2 465 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 WDFY4Q6ZS81 3184 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 SCN3AQ9NY46 2000 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ARHGEF17Q96PE2 2063 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-201ENST00000279247 MYO1GB0I1T2 1018 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 RASAL1O95294 804 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 CEACAM5P06731 702 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 HSD3B1P14060 373 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 HSD3B2P26439 372 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ASMTP46597 345 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 PLA2G16P53816 162 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 HBA1P69905 142 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ABHD18Q0P651 414 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 MTAPQ13126 283 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 LIN52Q52LA3 116 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 INTS11Q5TA45 600 aaKnown RBP17.21■□□□□ 0.35
CAPN1-201ENST00000279247 VN1R5Q7Z5H4 357 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ANKRD53Q8N9V6 530 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 TFAP2CQ92754 450 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 ABCG4Q9H172 646 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 MIEF1Q9NQG6 463 aa17.21■□□□□ 0.35
CAPN1-201ENST00000279247 AP1G1O43747 822 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 SCELO95171 688 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 OPN1SWP03999 348 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 ACADMP11310 421 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 HOXB3P14651 431 aaPredicted RBP17.21■□□□□ 0.34
CAPN1-201ENST00000279247 YAP1P46937 504 aaKnown RBP17.21■□□□□ 0.34
CAPN1-201ENST00000279247 ENPP2Q13822 863 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 DPY19L1Q2PZI1 675 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 ENPP7Q6UWV6 458 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 CARM1Q86X55 608 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 PGBD3Q8N328 593 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 GOLM1Q8NBJ4 401 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 RPLP0P6Q8NHW5 317 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 PPCDCQ96CD2 204 aa17.21■□□□□ 0.34
CAPN1-201ENST00000279247 FAM120CQ9NX05 1096 aaKnown RBP17.21■□□□□ 0.34
CAPN1-201ENST00000279247 SMPD3Q9NY59 655 aaPredicted RBP17.21■□□□□ 0.34
CAPN1-201ENST00000279247 WDR87Q6ZQQ6 2873 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 FAM220BPB1ANY3 271 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 TRIM23P36406 574 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 HTR4Q13639 388 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CYP27C1Q4G0S4 372 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 KRT78Q8N1N4 520 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 DHRSXQ8N5I4 330 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 PAPD5Q8NDF8 572 aaKnown RBP17.2■□□□□ 0.34
CAPN1-201ENST00000279247 OR8J2Q8NGG1 315 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CCL4L1Q8NHW4 92 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 C16orf78Q8WTQ4 265 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 TSACCQ96A04 125 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-201ENST00000279247 PDXPQ96GD0 296 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 MSLNLQ96KJ4 702 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CCDC115Q96NT0 180 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 DCAF13Q9NV06 445 aaKnown RBP17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CCDC88CQ9P219 2028 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 PTGER1P34995 402 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 GZMMP51124 257 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 PRSS53Q2L4Q9 553 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CCNYL2Q5T2Q4 361 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 TTC33Q6PID6 262 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-201ENST00000279247 CALHM3Q86XJ0 350 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 ZDHHC13Q8IUH4 622 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 SDCCAG3Q96C92 435 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 REXO5Q96IC2 774 aaKnown RBP17.2■□□□□ 0.34
CAPN1-201ENST00000279247 APOOQ9BUR5 198 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 C1QTNF2Q9BXJ5 285 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 MAP4K5Q9Y4K4 846 aa17.2■□□□□ 0.34
CAPN1-201ENST00000279247 KCNK5O95279 499 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 RPN2P04844 631 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 RPA4Q13156 261 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 COX20Q5RI15 118 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SLC30A9Q6PML9 568 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SZRD1Q7Z422 152 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 HORMAD1Q86X24 394 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 LAS2Q8IYD9 372 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 NAGSQ8N159 534 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 SMRP1Q8NCR6 262 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 FCRL1Q96LA6 429 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 REEP4Q9H6H4 257 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 NDRG2Q9UN36 371 aaKnown RBP17.19■□□□□ 0.34
CAPN1-201ENST00000279247 TDRD6O60522 2096 aaKnown RBP17.19■□□□□ 0.34
CAPN1-201ENST00000279247 G3V2T6 193 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 CACNB4O00305 520 aaPredicted RBP17.19■□□□□ 0.34
CAPN1-201ENST00000279247 UPK1AO00322 258 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 TNFRSF4P43489 277 aa17.19■□□□□ 0.34
CAPN1-201ENST00000279247 TRPC1P48995 793 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms