RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PHYHD1Q5SRE7 291 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 CARD17Q5XLA6 110 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 C18orf63Q68DL7 685 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TEX38Q6PEX7 206 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 FAM198BQ6UWH4 519 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MICALCLQ6ZW33 695 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MOB3CQ70IA8 216 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 RHOUQ7L0Q8 258 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 DET1Q7L5Y6 550 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 CRYBG2Q8N1P7 616 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 DNAAF3Q8N9W5 541 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MINDY2Q8NBR6 621 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 FAM76AQ8TAV0 307 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 POC1BQ8TC44 478 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TSEN15Q8WW01 171 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 SNX19Q92543 992 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 OXNAD1Q96HP4 312 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 THOC3Q96J01 351 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 C12orf66Q96MD2 445 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 ZNF583Q96ND8 569 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 OR1F2PQ96R84 312 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 SPAG8Q99932 426 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 C11orf70Q9BRQ4 267 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MLST8Q9BVC4 326 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PTDSS2Q9BVG9 487 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 SF3B5Q9BWJ5 86 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TSPYL1Q9H0U9 437 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 SLC26A1Q9H2B4 701 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 RNF41Q9H4P4 317 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 AZI2Q9H6S1 392 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MAGEF1Q9HAY2 307 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TMEM165Q9HC07 324 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 VAT1LQ9HCJ6 419 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TMEM74BQ9NUR3 256 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 ATXN10Q9UBB4 475 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MGAT4CQ9UBM8 478 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PEF1Q9UBV8 284 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 PACSIN3Q9UKS6 424 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 NDRG4Q9ULP0 352 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 SLC9A8Q9Y2E8 581 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 AAR2Q9Y312 384 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 PFASO15067 1338 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 DOCK2Q92608 1830 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PLIN4Q96Q06 1357 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 AK9Q5TCS8 1911 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 MAST2Q6P0Q8 1798 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 A0A0D9SFI3 127 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PRAMEF33A0A0G2JMD5 474 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 A0A1W2PPC1 479 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ERICH2A1L162 156 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 MEI4A8MW99 385 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 KBTBD13C9JR72 458 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 MAP2K7O14733 419 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CTDSPLO15194 276 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ZNF264O43296 627 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SEC14L5O43304 696 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ARHGEF9O43307 516 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TRIAP1O43715 76 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PEX1O43933 1283 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PRAMEF10O60809 474 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 CSO75390 466 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 WBP4O75554 376 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 CBR3O75828 277 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 RSL1D1O76021 490 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 SUN1O94901 812 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 KLHL2O95198 593 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PGLSO95336 258 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 TFP02787 698 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ALDOAP04075 364 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 UGT2B4P06133 528 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 PABPC4LP0CB38 370 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 APEHP13798 732 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 ZNF182P17025 639 aaPredicted RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 ITGALP20701 1170 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 NR4A1P22736 598 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SLC6A6P31641 620 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 RPL9P32969 192 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 SLC1A4P43007 532 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 MMP13P45452 471 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ME1P48163 572 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 LEPRP48357 1165 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 CRYBB1P53674 252 aaPredicted RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 CLDN8P56748 225 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 EEFSECP57772 596 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 MYL6P60660 151 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 DRAP1Q14919 205 aaPredicted RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 SYT16Q17RD7 645 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SGO1Q5FBB7 561 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 AKNAD1Q5T1N1 836 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SPOUT1Q5T280 376 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 CCNYL2Q5T2Q4 361 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 LRIF1Q5T3J3 769 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 HECTD2Q5U5R9 776 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 METRNLQ641Q3 311 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 SNRNP48Q6IEG0 339 aaKnown RBP4.38□□□□□ -1.71
CD44-202ENST00000278385 KIAA1161Q6NSJ0 714 aa4.38□□□□□ -1.71
CD44-202ENST00000278385 ACSM6Q6P461 480 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms