RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 PIP5K1BO14986 540 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 HDAC3O15379 428 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ZSCAN9O15535 394 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 TGDSO95455 350 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ETHE1O95571 254 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 STATHP02808 62 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 EIF2S1P05198 315 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 SLC35G6P0C7Q6 338 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 CCL4P13236 92 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ITGA1P56199 1179 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 RPS13P62277 151 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 MC2RQ01718 297 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 BTKQ06187 659 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 CSTF3Q12996 717 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 TARDBPQ13148 414 aaKnown RBP eCLIP16.4■□□□□ 0.22
SKP2-201ENST00000274254 IL11RAQ14626 422 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 PDCD2Q16342 344 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 HKDC1Q2TB90 917 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ADPRMQ3LIE5 342 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 XKR7Q5GH72 579 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SCIMPQ6UWF3 145 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 RAB11FIP2Q7L804 512 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 TMPRSS7Q7RTY8 843 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 BPHLQ86WA6 291 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 GALNT15Q8N3T1 639 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 GBP7Q8N8V2 638 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 OR8K5Q8NH50 307 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 CMTM7Q96FZ5 175 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 MACROD1Q9BQ69 325 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 AICDAQ9GZX7 198 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 FBXO8Q9NRD0 319 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 VTI1BQ9UEU0 232 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SERTAD3Q9UJW9 196 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SEC16AO15027 2179 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SKAP2O75563 359 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 OR2B3O76000 313 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 TGFB1P01137 390 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SERPIND1P05546 499 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 LINC00032P0C843 101 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ALOX15P16050 662 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 PTX3P26022 381 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 HNRNPH1P31943 449 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 GCGRP47871 477 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 FOXM1Q08050 763 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 RGS1Q08116 209 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 CUL3Q13618 768 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 PUM1Q14671 1186 aaKnown RBP eCLIP16.4■□□□□ 0.22
SKP2-201ENST00000274254 TMEM214Q6NUQ4 689 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 CYB5D1Q6P9G0 228 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 MAVSQ7Z434 540 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 ZNF655Q8N720 491 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 KCT2Q8NC54 265 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 CCT6BQ92526 530 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 C19orf60Q96EN9 201 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 SPRTNQ9H040 489 aaPredicted RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 OR51B5Q9H339 312 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 MEAF6Q9HAF1 191 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 STARD5Q9NSY2 213 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 RARRES3Q9UL19 164 aa16.4■□□□□ 0.22
SKP2-201ENST00000274254 RUVBL1Q9Y265 456 aaKnown RBP16.4■□□□□ 0.22
SKP2-201ENST00000274254 SPTBN2O15020 2390 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 NPIPB8E9PQR5 432 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 SLC28A1O00337 649 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 SHOX2O60902 331 aaPredicted RBP16.39■□□□□ 0.21
SKP2-201ENST00000274254 FGF5P12034 268 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 SEC24CP53992 1094 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 EMP3P54852 163 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 HMGCS1Q01581 520 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 GRM7Q14831 915 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 TMEM35AQ53FP2 167 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 DEPDC1Q5TB30 811 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 KHDRBS2Q5VWX1 349 aaKnown RBP16.39■□□□□ 0.21
SKP2-201ENST00000274254 TLDC1Q6P9B6 456 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 Q6ZSR9 355 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 DGLUCYQ7Z3D6 616 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 DDIASQ8IXT1 998 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 GPR135Q8IZ08 494 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 OR2T11Q8NH01 316 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 MS4A6EQ96DS6 147 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 C3orf30Q96M34 536 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 SERPINI1Q99574 410 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 NLNQ9BYT8 704 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 NUF2Q9BZD4 464 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 REXO4Q9GZR2 422 aaKnown RBP16.39■□□□□ 0.21
SKP2-201ENST00000274254 APMAPQ9HDC9 416 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 PFDN4Q9NQP4 134 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 VPS29Q9UBQ0 182 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 USH1CQ9Y6N9 552 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 SPTBN4Q9H254 2564 aa16.39■□□□□ 0.21
SKP2-201ENST00000274254 FAM149AA5PLN7 773 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 GMNCA6NCL1 334 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 PLD2O14939 933 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 SEMA3DO95025 777 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 SMIM10L1P0DMW3 83 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 ITIH1P19827 911 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 PRPH2P23942 346 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 ETV5P41161 510 aa16.38■□□□□ 0.21
SKP2-201ENST00000274254 STXBP1P61764 594 aaKnown RBP16.38■□□□□ 0.21
SKP2-201ENST00000274254 SNRPNP63162 240 aaKnown RBP16.38■□□□□ 0.21
SKP2-201ENST00000274254 GARNL3Q5VVW2 1013 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms