RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PHF21BQ96EK2 531 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CRB3Q9BUF7 120 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ERVK-6Q9BXR3 956 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CPEB1Q9BZB8 566 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 UFSP2Q9NUQ7 469 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 VNN3Q9NY84 501 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SLC6A5Q9Y345 797 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 COL1A2P08123 1366 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ZNF729A6NN14 1252 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 NFKBIEO00221 500 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 EEDO75530 441 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 OAZ2O95190 189 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SLC2A2P11168 524 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ANXA3P12429 323 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 HGFP14210 728 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PTPRAP18433 802 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ATP12AP54707 1039 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CSNK2BP67870 215 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GRM1Q13255 1194 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 TSTQ16762 297 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 TIMM50Q3ZCQ8 353 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 NOTUMQ6P988 496 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GCNT7Q6ZNI0 430 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 OTOP2Q7RTS6 562 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 KCNMB4Q86W47 210 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 NELL1Q92832 810 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 UCN3Q969E3 161 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 C11orf24Q96F05 449 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PARK7Q99497 189 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GAS2L1Q99501 681 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SLC38A3Q99624 504 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RAD9AQ99638 391 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ANKRD19PQ9H560 264 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GORASP2Q9H8Y8 452 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GPR160Q9UJ42 338 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 FEM1BQ9UK73 627 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 BTRCQ9Y297 605 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PRAMEF33A0A0G2JMD5 474 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CLCA1A8K7I4 914 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 A8MT66 165 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PRAMEF10O60809 474 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 HLA-DQB1P01920 261 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 FBP1P09467 338 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SPP1P10451 314 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PBX3P40426 434 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SNX16P57768 344 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RPS7P62081 194 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CLDN10P78369 228 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 DMC1Q14565 340 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 MXD4Q14582 209 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PUM1Q14671 1186 aaKnown RBP eCLIP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CPZQ66K79 652 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RHOUQ7L0Q8 258 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 LUZP2Q86TE4 346 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 KRT78Q8N1N4 520 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 DNAJC5GQ8N7S2 189 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 TMEM161BQ8NDZ6 487 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 OR52K1Q8NGK4 314 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ZNF419Q96HQ0 510 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PPM1MQ96MI6 270 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 MCOLN1Q9GZU1 580 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 EVA1AQ9H8M9 152 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 EXOSC4Q9NPD3 245 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PRMT8Q9NR22 394 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GPR83Q9NYM4 423 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SEC14L4Q9UDX3 406 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 BTNL2Q9UIR0 455 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GPR45Q9Y5Y3 372 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 A0A0A0MRY4 1105 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 IQCMA0A1B0GVH7 501 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 LCHNA4D1U4 455 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SLC9B1P1A6NJY1 282 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 VEGFDO43915 354 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 AOC2O75106 756 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 CREG1O75629 220 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 DHFRP00374 187 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 HEXBP07686 556 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 LTA4HP09960 611 aaKnown RBP8.9□□□□□ -0.98
PDGFC-201ENST00000274071 FPR3P25089 353 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 YWHABP31946 246 aaKnown RBP8.9□□□□□ -0.98
PDGFC-201ENST00000274071 DOC2BQ14184 412 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SSX1Q16384 188 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 CDO1Q16878 200 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 KIAA1614Q5VZ46 1190 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 TRIQKQ629K1 86 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SHQ1Q6PI26 577 aaKnown RBP8.9□□□□□ -0.98
PDGFC-201ENST00000274071 MOB2Q70IA6 237 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 KRT74Q7RTS7 529 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 XYLT1Q86Y38 959 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 Q8N402 240 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 EFHBQ8N7U6 833 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 WDR20Q8TBZ3 569 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 CREB3L4Q8TEY5 395 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 TSPEARQ8WU66 669 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 HGDQ93099 445 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 CREB3L1Q96BA8 519 aa8.9□□□□□ -0.98
PDGFC-201ENST00000274071 MRPS24Q96EL2 167 aaKnown RBP8.9□□□□□ -0.98
PDGFC-201ENST00000274071 SPATA13Q96N96 652 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms