RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 TMEM130Q8N3G9 435 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR4K17Q8NGC6 315 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 OR2L8Q8NGY9 312 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 TMCO6Q96DC7 493 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ZNF641Q96N77 438 aaPredicted RBP11.11□□□□□ -0.63
USP53-201ENST00000274030 PAAF1Q9BRP4 392 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 CD320Q9NPF0 282 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 MYO5BQ9ULV0 1848 aa11.11□□□□□ -0.63
USP53-201ENST00000274030 ZSCAN5BA6NJL1 495 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 KMOO15229 486 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 TACSTD2P09758 323 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SLC6A4P31645 630 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ABCA11PQ4W5N1 156 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 TAS1R3Q7RTX0 852 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 OR9A1PQ8NGU1 263 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SETD7Q8WTS6 366 aaKnown RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 SHISA4Q96DD7 197 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 FCRL3Q96P31 734 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 PCYT2Q99447 389 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SLC29A3Q9BZD2 475 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 HYKKA2RU49 373 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 E7EQ34 232 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 XPNPEP2O43895 674 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 EBLN1P0CF75 366 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 CBSLP0DN79 551 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 BMP8BP34820 402 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 CBSP35520 551 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 BMP8AQ7Z5Y6 402 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 CCDC116Q8IYX3 515 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 C2CD4AQ8NCU7 369 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 PAK6Q9NQU5 681 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 GNG8Q9UK08 70 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ZNF878C9JN71 531 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PIRO00625 290 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ITGA10O75578 1167 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PCSK2P16519 638 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SOX4Q06945 474 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 PTGR1Q14914 329 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 WSCD2Q2TBF2 565 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PLEKHG6Q3KR16 790 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SPERTQ8NA61 448 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 GPR62Q9BZJ7 368 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ACTR3BQ9P1U1 418 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 Q9Y3F1 56 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PCDHB11Q9Y5F2 797 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PTGDR2Q9Y5Y4 395 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SLIT2O94813 1529 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PRSS51A0A1B0GVH4 220 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 APOL3O95236 402 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 GALTP07902 379 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 HNF1BP35680 557 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ZNF267Q14586 743 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 GPRIN1Q7Z2K8 1008 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 P4HA3Q7Z4N8 544 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 RASGEF1AQ8N9B8 481 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 SDHAF3Q9NRP4 125 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 LSM1O15116 133 aaKnown RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 CDRT1O95170 752 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 GSTT2BP0CG30 244 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 CDH11P55287 796 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PITPNAQ00169 270 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 NNATQ16517 81 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 PRAMEF17Q5VTA0 474 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 ZNF782Q6ZMW2 699 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 SMG8Q8ND04 991 aaKnown RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 SORCS1Q8WY21 1168 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 IGSF8Q969P0 613 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 RC3H2Q9HBD1 1191 aaKnown RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 IL21RQ9HBE5 538 aa11.1□□□□□ -0.63
USP53-201ENST00000274030 NLE1Q9NVX2 485 aaPredicted RBP11.1□□□□□ -0.63
USP53-201ENST00000274030 NPIPA5E9PKD4 350 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 ST3GAL3Q11203 375 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CBLBQ13191 982 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 TMEM44Q2T9K0 475 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CYBRD1Q53TN4 286 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 TMEM164Q5U3C3 297 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 KRTCAP2Q8N6L1 136 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 TCEANCQ8N8B7 351 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 OR8K3Q8NH51 312 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CEP76Q8TAP6 659 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 METTL7AQ9H8H3 244 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 NPIPA1Q9UND3 350 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 TSPAN6O43657 245 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 AKAP8O43823 692 aaKnown RBP11.09□□□□□ -0.63
USP53-201ENST00000274030 RCBTB2O95199 551 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 SOD2P04179 222 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 AOC1P19801 751 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 DECR1Q16698 335 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 IRF7Q92985 503 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CD180Q99467 661 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 BEX2Q9BXY8 128 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 SOX17Q9H6I2 414 aaPredicted RBP11.09□□□□□ -0.63
USP53-201ENST00000274030 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 WDR45Q9Y484 360 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 MATN2O00339 956 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 CD83Q01151 205 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 C1orf61Q13536 156 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 PON3Q15166 354 aa11.09□□□□□ -0.63
USP53-201ENST00000274030 UPP1Q16831 310 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms