RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 TTC23LQ6PF05 361 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 AFTPHQ6ULP2 937 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 UNC5DQ6UXZ4 953 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 OVCH1Q7RTY7 1134 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 DCUN1D3Q8IWE4 304 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 SCUBE1Q8IWY4 988 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 PALM2Q8IXS6 379 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 PIANPQ8IYJ0 282 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 SLC22A15Q8IZD6 547 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 DNAJC22Q8N4W6 341 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 CISD2Q8N5K1 135 aaKnown RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 DNAAF3Q8N9W5 541 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 ST6GALNAC3Q8NDV1 305 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 FLVCR1-AS1Q8TAF5 88 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 AGAP4Q96P64 663 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 PANX2Q96RD6 677 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 TRIM5Q9C035 493 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 SPRTNQ9H040 489 aaPredicted RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 EURLQ9NYK6 297 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 DHCR7Q9UBM7 475 aaKnown RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
LRTM1-201ENST00000273286 CDYLQ9Y232 598 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 CNTRLQ7Z7A1 2325 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 FER1L5A0AVI2 2057 aa9.25□□□□□ -0.93
LRTM1-201ENST00000273286 TRBV23-1A0A0A0MS06 115 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 A1L4Q6 167 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 TARM1B6A8C7 271 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 CCL22O00626 93 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 KPNA5O15131 536 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 KRT86O43790 486 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 SRPX2O60687 465 aaPredicted RBP9.24□□□□□ -0.93
LRTM1-201ENST00000273286 UMODP07911 640 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 MAGP20916 626 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 CD9P21926 228 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 PKLRP30613 574 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 FOXN2P32314 431 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 TSFMP43897 325 aaKnown RBP9.24□□□□□ -0.93
LRTM1-201ENST00000273286 SPARCL1Q14515 664 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 TMED2Q15363 201 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 CRB2Q5IJ48 1285 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 IGFL2Q6UWQ7 119 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 PPP1R32Q7Z5V6 425 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 TRIM73Q86UV7 250 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 FAM71DQ8N9W8 422 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 TTC29Q8NA56 475 aaPredicted RBP9.24□□□□□ -0.93
LRTM1-201ENST00000273286 GSDMBQ8TAX9 411 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 ZUFSPQ96AP4 578 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 RANBP9Q96S59 729 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 FRMD8P1Q9BZ68 369 aaPredicted RBP9.24□□□□□ -0.93
LRTM1-201ENST00000273286 SPHK1Q9NYA1 384 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 CDC23Q9UJX2 597 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 ANAPC5Q9UJX4 755 aa9.24□□□□□ -0.93
LRTM1-201ENST00000273286 EPN1Q9Y6I3 576 aaPredicted RBP9.24□□□□□ -0.93
LRTM1-201ENST00000273286 PCDH17O14917 1159 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 DSCR3O14972 297 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 METTL18O95568 372 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 TPH1P17752 444 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 ADRA1DP25100 572 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
LRTM1-201ENST00000273286 SELENOPP49908 381 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 SUMO1P63165 101 aaKnown RBP9.23□□□□□ -0.93
LRTM1-201ENST00000273286 PRAMEP78395 509 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 BRD3Q15059 726 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 TUBB8Q3ZCM7 444 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 PRMT9Q6P2P2 845 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 PEX26Q7Z412 305 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 GAS2L3Q86XJ1 694 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 TICAM1Q8IUC6 712 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 REXO1L1PQ8IX06 675 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 OR2L8Q8NGY9 312 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 MAGEC3Q8TD91 643 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 ANP32BQ92688 251 aaKnown RBP9.23□□□□□ -0.93
LRTM1-201ENST00000273286 RAD51AP1Q96B01 352 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 C19orf60Q96EN9 201 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 PANX3Q96QZ0 392 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 CARD6Q9BX69 1037 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 LHPPQ9H008 270 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 CUTCQ9NTM9 273 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 RIC8BQ9NVN3 520 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.23□□□□□ -0.93
LRTM1-201ENST00000273286 AMFRQ9UKV5 643 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 SLC39A10Q9ULF5 831 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 TCAF1Q9Y4C2 921 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 FAM169AQ9Y6X4 670 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 CACNA1DQ01668 2161 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 NUP210LQ5VU65 1888 aa9.23□□□□□ -0.93
LRTM1-201ENST00000273286 E7EVH7 732 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 AP3B1O00203 1094 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 HCRTR1O43613 425 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 PHF2O75151 1096 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 GPC4O75487 556 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 SUN1O94901 812 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 CLDN1O95832 211 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 PRSS56P0CW18 603 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 RNF224P0DH78 156 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 TPBGLP0DKB5 382 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 FDXRP22570 491 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 FDFT1P37268 417 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 DCTP40126 519 aa9.22□□□□□ -0.93
LRTM1-201ENST00000273286 TTPAP49638 278 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms