RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 KLK1P06870 262 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 EFNA1P20827 205 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 PEX2P28328 305 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 GRIA3P42263 894 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 KIR3DL1P43629 444 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PDE7AQ13946 482 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ZFP1Q6P2D0 407 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 GPR180Q86V85 440 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ITCHQ96J02 903 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PITHD1Q9GZP4 211 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 MRPS30Q9NP92 439 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 OR1F1O43749 312 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PCSK2P16519 638 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 ZIC1Q15915 447 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PRRT3Q5FWE3 981 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 DEPDC1Q5TB30 811 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 CALHM3Q86XJ0 350 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 AMER3Q8N944 861 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 SHDQ96IW2 340 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 COPS7BQ9H9Q2 264 aaPredicted RBP11.6□□□□□ -0.55
SDE2-201ENST00000272091 ATP6V1HQ9UI12 483 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 MCM8Q9UJA3 840 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 PCDHB3Q9Y5E6 796 aa11.6□□□□□ -0.55
SDE2-201ENST00000272091 GNG14A0A1W2PPG7 69 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 METTL12A8MUP2 240 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 PPM1DO15297 605 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ERN1O75460 977 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 STATHP02808 62 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 UBE2IP63279 158 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 SRSF11Q05519 484 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ZNF425Q6IV72 752 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 HMBOX1Q6NT76 420 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 DTWD1Q8N5C7 304 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ZNF548Q8NEK5 533 aaPredicted RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 LCN9Q8WX39 176 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 RPF2Q9H7B2 306 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 MYNNQ9NPC7 610 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 TDRD6O60522 2096 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 TRBC2A0A5B9 178 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 CAPNS1P04632 268 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 FURINP09958 794 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 CXCR2P25025 360 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 SHMT2P34897 504 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ASMTP46597 345 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 GPR18Q14330 331 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 DUOXA1Q1HG43 343 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 TLDC1Q6P9B6 456 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 NAGSQ8N159 534 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 SPEM1Q8N4L4 309 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 CANT1Q8WVQ1 401 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 NELL1Q92832 810 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 MACROD1Q9BQ69 325 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 DPH7Q9BTV6 452 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 KAT8Q9H7Z6 458 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 BCAP29Q9UHQ4 241 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ADGRE2Q9UHX3 823 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 SNX13Q9Y5W8 968 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ANKDD1BA6NHY2 528 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 K7ESF4 209 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 NUDT1P36639 197 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 SNRPNP63162 240 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 PHEXP78562 749 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 DMWDQ09019 674 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 OGFRL1Q5TC84 451 aaPredicted RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 OR10A6Q8NH74 314 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 CXorf40BQ96DE9 158 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 DUSP26Q9BV47 211 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 SARGQ9BW04 601 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 KLHL31Q9H511 634 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 FAM120CQ9NX05 1096 aaKnown RBP11.59□□□□□ -0.55
SDE2-201ENST00000272091 OR6C2Q9NZP2 312 aa11.59□□□□□ -0.55
SDE2-201ENST00000272091 ARHGAP10A1A4S6 786 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 SEMA3DO95025 777 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 MAOBP27338 520 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 NDUFS1P28331 727 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 TAS2R50P59544 299 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 ILF3Q12906 894 aaKnown RBP eCLIP11.58□□□□□ -0.56
SDE2-201ENST00000272091 ADGRG5Q8IZF4 528 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 CCDC115Q96NT0 180 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 LRRC61Q9BV99 259 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 TRIM4Q9C037 500 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 RMND5AQ9H871 391 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 AQP12BA6NM10 295 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 NDUFS4O43181 175 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 MAP3K13O43283 966 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 DCNP07585 359 aaKnown RBP11.58□□□□□ -0.56
SDE2-201ENST00000272091 GGT1P19440 569 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 SLC7A1P30825 629 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 C1orf61Q13536 156 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 AQP12AQ8IXF9 295 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 DNAJB8Q8NHS0 232 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 C1orf216Q8TAB5 229 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 KLHDC7BQ96G42 594 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 OR2A14Q96R47 310 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 NELL2Q99435 816 aa11.58□□□□□ -0.56
SDE2-201ENST00000272091 MUC13Q9H3R2 512 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms