RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ARRDC3Q96B67 414 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 NUS1Q96E22 293 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 LRIG1Q96JA1 1093 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 PDP1Q9P0J1 537 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 GULP1Q9UBP9 304 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 AASSQ9UDR5 926 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 RAPGEFL1Q9UHV5 662 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 BTNL2Q9UIR0 455 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SAMHD1Q9Y3Z3 626 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SLC9A3R1O14745 358 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 GBAP04062 536 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 FPR1P21462 350 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 FMO3P31513 532 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 DNAJA1P31689 397 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ARHGDIAP52565 204 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 TMBIM6P55061 237 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 MEF2AQ02078 507 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 HYAL1Q12794 435 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 BNIP3Q12983 259 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CDK5R2Q13319 367 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 IL18R1Q13478 541 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ZC3H12BQ5HYM0 836 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CAPN13Q6MZZ7 669 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CRTC3Q6UUV7 619 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 TBC1D15Q8TC07 691 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 RSPRY1Q96DX4 576 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 PLGRKTQ9HBL7 147 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 C1orf226A1L170 272 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 PSMD11O00231 422 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 UGT2B11O75310 529 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ANGPTL1O95841 491 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF182P17025 639 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-201ENST00000266679 RYKP34925 604 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 MAPK9P45984 424 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 GPR1P46091 355 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 TUBA3CQ13748 450 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF658BQ4V348 819 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ANXA8L1Q5VT79 327 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 GTF2IRD2BQ6EKJ0 949 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 GTF2IRD2Q86UP8 949 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ST13P5Q8NFI4 369 aaPredicted RBP12.4□□□□□ -0.42
CPSF6-201ENST00000266679 OR4K1Q8NGD4 311 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 WDR48Q8TAF3 677 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 HCAR2Q8TDS4 363 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 WFIKKN2Q8TEU8 576 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 ZFP90Q8TF47 636 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 MUL1Q969V5 352 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 TBC1D20Q96BZ9 403 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 HSPBAP1Q96EW2 488 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 NODALQ96S42 347 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 CHST8Q9H2A9 424 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 PREBQ9HCU5 417 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 MRPS23Q9Y3D9 190 aaKnown RBP12.4□□□□□ -0.42
CPSF6-201ENST00000266679 RWDD3Q9Y3V2 267 aa12.4□□□□□ -0.42
CPSF6-201ENST00000266679 MAN1A2O60476 641 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 MMP20O60882 483 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 LILRB5O75023 590 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PRNPP04156 253 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 RB1P06400 928 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF8P17098 575 aaPredicted RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 NR4A1P22736 598 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 LTBRP36941 435 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SLC6A11P48066 632 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ITGA1P56199 1179 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PCDH1Q08174 1060 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TMED1Q13445 227 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 BCL7AQ4VC05 210 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 KDM4DQ6B0I6 523 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 LAIR1Q6GTX8 287 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 XKR5Q6UX68 686 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ZNF852Q6ZMS4 543 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TRMT11Q7Z4G4 463 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 B3GNT8Q7Z7M8 397 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 NLRP8Q86W28 1048 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 CPA6Q8N4T0 437 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ATG16L2Q8NAA4 619 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 SETD9Q8NE22 299 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 VPS37AQ8NEZ2 397 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TANKQ92844 425 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 REPS1Q96D71 796 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 METTL2AQ96IZ6 378 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ZFYVE19Q96K21 471 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 CSF3RQ99062 836 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 ZCCHC2Q9C0B9 1178 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TRIT1Q9H3H1 467 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 REEP1Q9H902 201 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 EXO1Q9UQ84 846 aaKnown RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 GMPPBQ9Y5P6 360 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 MUC22E2RYF6 1773 aaPredicted RBP12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TRIM64BA6NI03 449 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 PRRT4C9JH25 899 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 INMTO95050 263 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 TGFB1P01137 390 aa12.39□□□□□ -0.43
CPSF6-201ENST00000266679 C6P13671 934 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms