RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 SLC14A1Q13336 389 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 KIAA0040Q15053 153 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 HKDC1Q2TB90 917 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 INAVAQ3KP66 663 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TOR1AIP1Q5JTV8 583 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 STPG1Q5TH74 334 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 IL23RQ5VWK5 629 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TMEM71Q6P5X7 295 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 WDR74Q6RFH5 385 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 RNF165Q6ZSG1 346 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CHSY3Q70JA7 882 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 RNF44Q7L0R7 432 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 UBE3DQ7Z6J8 389 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ZFAND4Q86XD8 727 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MCATQ8IVS2 390 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 DNAJC22Q8N4W6 341 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 C1orf52Q8N6N3 182 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 GBP7Q8N8V2 638 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 AMER3Q8N944 861 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 KCT2Q8NC54 265 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CHTF18Q8WVB6 975 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 SLC13A3Q8WWT9 602 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CMTM7Q96FZ5 175 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CCT7Q99832 543 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ZFYVE21Q9BQ24 234 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 SARGQ9BW04 601 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 EBPLQ9BY08 206 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MS4A8Q9BY19 250 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MYLK2Q9H1R3 596 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 EPB41L1Q9H4G0 881 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 BRF2Q9HAW0 419 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 SAR1AQ9NR31 198 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 C1orf109Q9NX04 203 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 SOHLH2Q9NX45 425 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ANKMY1Q9P2S6 941 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 DLGAP4Q9Y2H0 992 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TSC22D4Q9Y3Q8 395 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MN1Q10571 1320 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 COL5A1P20908 1838 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 FAM186AA6NE01 2351 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ADAMTS20P59510 1910 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 IGHV5-10-1A0A0J9YXX1 117 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 LRIT2A6NDA9 550 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 VPS4BO75351 444 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CLEC3AO75596 197 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 RSL1D1O76021 490 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 KLHL18O94889 574 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 FKBP9O95302 570 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CPNE6O95741 557 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 G6PDP11413 515 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ACP1P24666 158 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TACR1P25103 407 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 PTX3P26022 381 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 AHRP35869 848 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 GABRA4P48169 554 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ACADVLP49748 655 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 PLA2G16P53816 162 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ERVK-8P63133 956 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 GPR19Q15760 415 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 DEPDC1Q5TB30 811 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 KHDRBS2Q5VWX1 349 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 B3GNT8Q7Z7M8 397 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ASPGQ86U10 573 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TREML1Q86YW5 311 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 LIX1Q8N485 282 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CHCHD4Q8N4Q1 142 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 DTWD1Q8N5C7 304 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TBC1D19Q8N5T2 526 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 CLHC1Q8NHS4 586 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ERP27Q96DN0 273 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TM4SF19Q96DZ7 209 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 EGLN2Q96KS0 407 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 TEX37Q96LM6 180 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 PPP3R2Q96LZ3 170 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 GFM1Q96RP9 751 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 PITHD1Q9GZP4 211 aaPredicted RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 KCNH6Q9H252 994 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 ZNF385DQ9H6B1 395 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 LHX9Q9NQ69 397 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 PFDN4Q9NQP4 134 aa9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 MRPS2Q9Y399 296 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 COPG1Q9Y678 874 aaKnown RBP9.29□□□□□ -0.92
SNRNP40-201ENST00000263694 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PTPRZ1P23471 2315 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 CROCCQ5TZA2 2017 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ARHGAP10A1A4S6 786 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PROB1E7EW31 1015 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 NTN3O00634 580 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PLPP1O14494 284 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 EEDO75530 441 aaKnown RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 DCTN3O75935 186 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 ZBTB11O95625 1053 aaPredicted RBP9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 KLK1P06870 262 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 SERPINA6P08185 405 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 HSD3B1P14060 373 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 FOLR1P15328 257 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 PRPH2P23942 346 aa9.28□□□□□ -0.92
SNRNP40-201ENST00000263694 HSD3B2P26439 372 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms