RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 ZNF33BQ06732 778 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 NKAIN1Q4KMZ8 207 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 MFSD4BQ5TF39 518 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 C1orf189Q5VU69 101 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 IRAK1BP1Q5VVH5 260 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 FRMPD2BQ6IN97 320 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 PAGE2Q7Z2X7 111 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 RAB43Q86YS6 212 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 PIP4P2Q8N4L2 257 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 BANPQ8N9N5 519 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 ARMC2Q8NEN0 867 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 METTL6Q8TCB7 284 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 NT5CQ8TCD5 201 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 TCP10LQ8TDR4 215 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 ADAMTS18Q8TE60 1221 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 FKBP10Q96AY3 582 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 NACC2Q96BF6 587 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 MIEF2Q96C03 454 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 WDR34Q96EX3 536 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 OR4K3Q96R72 315 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 TMEM79Q9BSE2 394 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 REXO4Q9GZR2 422 aaKnown RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 MKKSQ9NPJ1 570 aaPredicted RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 SEMA4BQ9NPR2 832 aaPredicted RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 STARD5Q9NSY2 213 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 OXSMQ9NWU1 459 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 GEMIN8Q9NWZ8 242 aaKnown RBP11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 PSD3Q9NYI0 1048 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 COPG2Q9UBF2 871 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 RAXQ9Y2V3 346 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 PIKFYVEQ9Y2I7 2098 aa11.97□□□□□ -0.49
CLNS1A-201ENST00000263309 LOC105369274A0A096LPK9 316 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 LOC102723532A0A0G2JNH3 316 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 A8MT66 165 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 H0YIV9 168 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 E2F3O00716 465 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 CLDN4O14493 209 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 BIRC5O15392 142 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 B3GALT2O43825 422 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DLX3O60479 287 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ULK1O75385 1050 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DLGAP3O95886 979 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ENO1P06733 434 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 MTHFD2P13995 350 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ALOX12P18054 663 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 PTPN4P29074 926 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ALDH3A1P30838 453 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 BCL6P41182 706 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 TSFMP43897 325 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 AGTR2P50052 363 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ARFIP1P53367 373 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 PCDH1Q08174 1060 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 LCP2Q13094 533 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DNASE1L3Q13609 305 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 SSPNQ14714 243 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 CPSF6Q16630 551 aaKnown RBP eCLIP11.96□□□□□ -0.491e-6■□□□□ 9.5
CLNS1A-201ENST00000263309 ZNF678Q5SXM1 525 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 AGBL2Q5U5Z8 902 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 GPRIN3Q6ZVF9 776 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 SYVN1Q86TM6 617 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DTX1Q86Y01 620 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 PLD3Q8IV08 490 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 OR4N4Q8N0Y3 316 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 MZB1Q8WU39 189 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DYDC1Q8WWB3 177 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 RGMAQ96B86 450 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 L3HYPDHQ96EM0 354 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ZNF285Q96NJ3 590 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 KCNC2Q96PR1 638 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 FAM111AQ96PZ2 611 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ARHGAP9Q9BRR9 750 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 C1QTNF3Q9BXJ4 246 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 RHBGQ9H310 441 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ENAMQ9NRM1 1142 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 C14orf105Q9NVL8 296 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 DHCR7Q9UBM7 475 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 TRPC4Q9UBN4 977 aa11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 C19orf25Q9UFG5 118 aaPredicted RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 ARID1BQ8NFD5 2236 aaPredicted RBP11.96□□□□□ -0.49
CLNS1A-201ENST00000263309 BPTFQ12830 3046 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 A0A087WV48 116 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 IGKV1-8A0A0C4DH67 115 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 BLACEA4D250 179 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 HMGB1P1B2RPK0 211 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 WFS1O76024 890 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 MYO1DO94832 1006 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 SIX3O95343 332 aaPredicted RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 NSA2O95478 260 aaKnown RBP11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 PROCP04070 461 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 HEXBP07686 556 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 GRK2P25098 689 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 GABRA4P48169 554 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 NAGLUP54802 743 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 RRADP55042 308 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 VAC14Q08AM6 782 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 CLN3Q13286 438 aa11.95□□□□□ -0.5
CLNS1A-201ENST00000263309 DDX39BQ13838 428 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms