RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 OLIG3Q7RTU3 272 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SERPINA11Q86U17 422 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TSPYL5Q86VY4 417 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 MEX3DQ86XN8 651 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 TMEM25Q86YD3 366 aa8.79□□□□□ -1
MSH4-201ENST00000263187 UBE2J2Q8N2K1 259 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OR10G2Q8NGC3 310 aa8.79□□□□□ -1
MSH4-201ENST00000263187 HUS1BQ8NHY5 278 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CAPSLQ8WWF8 208 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SCRN2Q96FV2 425 aa8.79□□□□□ -1
MSH4-201ENST00000263187 IGSF21Q96ID5 467 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OR4K3Q96R72 315 aa8.79□□□□□ -1
MSH4-201ENST00000263187 OR5M11Q96RB7 305 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PKP4Q99569 1192 aa8.79□□□□□ -1
MSH4-201ENST00000263187 RIOK2Q9BVS4 552 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 ITPAQ9BY32 194 aa8.79□□□□□ -1
MSH4-201ENST00000263187 C11orf16Q9NQ32 467 aa8.79□□□□□ -1
MSH4-201ENST00000263187 IMPAD1Q9NX62 359 aa8.79□□□□□ -1
MSH4-201ENST00000263187 MS4A12Q9NXJ0 267 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ATP11BQ9Y2G3 1177 aa8.79□□□□□ -1
MSH4-201ENST00000263187 NAALAD2Q9Y3Q0 740 aa8.79□□□□□ -1
MSH4-201ENST00000263187 H3BM21 787 aa8.79□□□□□ -1
MSH4-201ENST00000263187 RGS5O15539 181 aa8.79□□□□□ -1
MSH4-201ENST00000263187 GREM1O60565 184 aa8.79□□□□□ -1
MSH4-201ENST00000263187 GCM2O75603 506 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 RPLP2P05387 115 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 MAPK1P28482 360 aa8.79□□□□□ -1
MSH4-201ENST00000263187 HOXD12P35452 270 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CTSKP43235 329 aa8.79□□□□□ -1
MSH4-201ENST00000263187 SELENBP1Q13228 472 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PPIGQ13427 754 aaKnown RBP eCLIP8.79□□□□□ -1
MSH4-201ENST00000263187 RGNQ15493 299 aa8.79□□□□□ -1
MSH4-201ENST00000263187 GPR33Q49SQ1 333 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ARMCX4Q5H9R4 360 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ZNF362Q5T0B9 420 aaPredicted RBP8.79□□□□□ -1
MSH4-201ENST00000263187 AGTRAPQ6RW13 159 aa8.79□□□□□ -1
MSH4-201ENST00000263187 CBLL1Q75N03 491 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TSEN54Q7Z6J9 526 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 LGI4Q8N135 537 aa8.79□□□□□ -1
MSH4-201ENST00000263187 ZNF740Q8NDX6 193 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TESCQ96BS2 214 aa8.79□□□□□ -1
MSH4-201ENST00000263187 C7orf34Q96L11 122 aa8.79□□□□□ -1
MSH4-201ENST00000263187 TSEN34Q9BSV6 310 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 WRAP53Q9BUR4 548 aaKnown RBP8.79□□□□□ -1
MSH4-201ENST00000263187 ZDHHC4Q9NPG8 344 aa8.79□□□□□ -1
MSH4-201ENST00000263187 NECTIN3Q9NQS3 549 aa8.79□□□□□ -1
MSH4-201ENST00000263187 WBP1LQ9NX94 342 aa8.79□□□□□ -1
MSH4-201ENST00000263187 NDUFAF4Q9P032 175 aa8.79□□□□□ -1
MSH4-201ENST00000263187 PLAGL1Q9UM63 463 aa8.79□□□□□ -1
MSH4-201ENST00000263187 DUSP12Q9UNI6 340 aa8.79□□□□□ -1
MSH4-201ENST00000263187 B3GNT3Q9Y2A9 372 aa8.79□□□□□ -1
MSH4-201ENST00000263187 MICAL3Q7RTP6 2002 aa8.79□□□□□ -1
MSH4-201ENST00000263187 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 HTR3EA5X5Y0 456 aa8.78□□□□□ -1
MSH4-201ENST00000263187 PRAMEF25A6NGN4 478 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CTDSP2O14595 271 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SH3BP5O60239 455 aa8.78□□□□□ -1
MSH4-201ENST00000263187 APOL3O95236 402 aa8.78□□□□□ -1
MSH4-201ENST00000263187 STATHP02808 62 aa8.78□□□□□ -1
MSH4-201ENST00000263187 HOXB9P17482 250 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 MAGEA8P43361 318 aa8.78□□□□□ -1
MSH4-201ENST00000263187 DAB2P98082 770 aa8.78□□□□□ -1
MSH4-201ENST00000263187 KCNC4Q03721 635 aa8.78□□□□□ -1
MSH4-201ENST00000263187 KEAP1Q14145 624 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SF3B4Q15427 424 aaKnown RBP eCLIP8.78□□□□□ -1
MSH4-201ENST00000263187 ZNF404Q494X3 552 aa8.78□□□□□ -1
MSH4-201ENST00000263187 RPS26P11Q5JNZ5 115 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 PRSS48Q7RTY5 328 aa8.78□□□□□ -1
MSH4-201ENST00000263187 LRRC70Q7Z2Q7 622 aa8.78□□□□□ -1
MSH4-201ENST00000263187 RNF130Q86XS8 419 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CACUL1Q86Y37 369 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SVOPQ8N4V2 548 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CELF2-AS1Q8N7Q2 184 aa8.78□□□□□ -1
MSH4-201ENST00000263187 VANGL1Q8TAA9 524 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 ZNF675Q8TD23 568 aa8.78□□□□□ -1
MSH4-201ENST00000263187 UBTD2Q8WUN7 234 aa8.78□□□□□ -1
MSH4-201ENST00000263187 S100ZQ8WXG8 99 aa8.78□□□□□ -1
MSH4-201ENST00000263187 TMEM169Q96HH4 297 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CCM2Q9BSQ5 444 aa8.78□□□□□ -1
MSH4-201ENST00000263187 RDH14Q9HBH5 336 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CTPS2Q9NRF8 586 aa8.78□□□□□ -1
MSH4-201ENST00000263187 ADPRHL2Q9NX46 363 aa8.78□□□□□ -1
MSH4-201ENST00000263187 PCDHB11Q9Y5F2 797 aa8.78□□□□□ -1
MSH4-201ENST00000263187 WWP2O00308 870 aa8.78□□□□□ -1
MSH4-201ENST00000263187 PLK4O00444 970 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SNPHO15079 494 aa8.78□□□□□ -1
MSH4-201ENST00000263187 RFPL2O75678 378 aa8.78□□□□□ -1
MSH4-201ENST00000263187 JUPP14923 745 aa8.78□□□□□ -1
MSH4-201ENST00000263187 JUNDP17535 347 aa8.78□□□□□ -1
MSH4-201ENST00000263187 CHI3L1P36222 383 aaPredicted RBP8.78□□□□□ -1
MSH4-201ENST00000263187 SLC6A12P48065 614 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SPINT3P49223 89 aa8.78□□□□□ -1
MSH4-201ENST00000263187 EPHB3P54753 998 aa8.78□□□□□ -1
MSH4-201ENST00000263187 SNRPD1P62314 119 aaKnown RBP8.78□□□□□ -1
MSH4-201ENST00000263187 MXD1Q05195 221 aa8.78□□□□□ -1
MSH4-201ENST00000263187 PROX2Q3B8N5 592 aa8.78□□□□□ -1
MSH4-201ENST00000263187 TPRG1LQ5T0D9 272 aa8.78□□□□□ -1
MSH4-201ENST00000263187 DESI1Q6ICB0 168 aa8.78□□□□□ -1
MSH4-201ENST00000263187 ZNF605Q86T29 641 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms