RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ATP5C1P36542 298 aaKnown RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 TLE2Q04725 743 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 GRIK2Q13002 908 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 ARMC4Q5T2S8 1044 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 PRSS48Q7RTY5 328 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 TSEN54Q7Z6J9 526 aaKnown RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 C1orf52Q8N6N3 182 aaKnown RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 SYT14Q8NB59 555 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 ITPKCQ96DU7 683 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 DEPDC7Q96QD5 511 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 ACAT2Q9BWD1 397 aa12.52□□□□□ -0.4
SNX1-201ENST00000261889 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 TNPO3Q9Y5L0 923 aaKnown RBP12.52□□□□□ -0.4
SNX1-201ENST00000261889 ZW10O43264 779 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CPNE3O75131 537 aaKnown RBP12.52□□□□□ -0.41
SNX1-201ENST00000261889 TRBC1P01850 177 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 KRT6AP02538 564 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 KRT6BP04259 564 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 OR1D2P34982 312 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 KRT6CP48668 564 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 YBEYP58557 167 aaPredicted RBP12.52□□□□□ -0.41
SNX1-201ENST00000261889 ALDH6A1Q02252 535 aaKnown RBP12.52□□□□□ -0.41
SNX1-201ENST00000261889 CACNG1Q06432 222 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 KCNA10Q16322 511 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 SPDYE7PQ495Y7 208 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 XKR6Q5GH73 641 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 ZNF605Q86T29 641 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 BBS7Q8IWZ6 715 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 SLC34A3Q8N130 599 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 COQ8BQ96D53 544 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 MYO19Q96H55 970 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 ZNF221Q9UK13 617 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CARD8Q9Y2G2 431 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 IFT52Q9Y366 437 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CHD5Q8TDI0 1954 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 GLYATL1P3A0A0U1RQE8 302 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 NOTOA8MTQ0 251 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 FAM220BPB1ANY3 271 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 E7EQ34 232 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 M0QX08 132 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 GPX5O75715 221 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CCNDBP1O95273 360 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 EPOP01588 193 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CXCR2P25025 360 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 ACVR2AP27037 513 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 ABHD18Q0P651 414 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CDH18Q13634 790 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 INSL4Q14641 139 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CCDC58Q4VC31 144 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 CXorf57Q6NSI4 855 aaKnown RBP12.52□□□□□ -0.41
SNX1-201ENST00000261889 GALNT13Q8IUC8 556 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 NLGN4YQ8NFZ3 816 aaPredicted RBP12.52□□□□□ -0.41
SNX1-201ENST00000261889 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 C1QTNF3Q9BXJ4 246 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 KCNH6Q9H252 994 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 TM9SF3Q9HD45 589 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 ZNF226Q9NYT6 803 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 MOSPD1Q9UJG1 213 aa12.52□□□□□ -0.41
SNX1-201ENST00000261889 H3BQ06 376 aaPredicted RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 SUV39H1O43463 412 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 TNFSF8P32971 234 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 SLC15A1P46059 708 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 SLC11A2P49281 568 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 RGS6P49758 472 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 IRF8Q02556 426 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 PPIGQ13427 754 aaKnown RBP eCLIP12.51□□□□□ -0.412e-7■■□□□ 12.1
SNX1-201ENST00000261889 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 PLEKHG6Q3KR16 790 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 LIPKQ5VXJ0 399 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 AMER2Q8N7J2 671 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 IL17RDQ8NFM7 739 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 PHOX2BQ99453 314 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 SH3GL1Q99961 368 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 ABCB8Q9NUT2 735 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 TBC1D24Q9ULP9 559 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 TMEM98Q9Y2Y6 226 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 ALPK2Q86TB3 2170 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 SLC28A1O00337 649 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 STC2O76061 302 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 RPLP0P05388 317 aaKnown RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 ITGAMP11215 1152 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 HNF4AP41235 474 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 MNX1P50219 401 aaPredicted RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 ZFP69Q49AA0 526 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 RBM45Q8IUH3 476 aaKnown RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 GALNT12Q8IXK2 581 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 DNAJC22Q8N4W6 341 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 SLC43A3Q8NBI5 491 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 GLB1L3Q8NCI6 653 aaPredicted RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 LINC01599Q8WXQ3 324 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 OLA1Q9NTK5 396 aaKnown RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 GIMAP4Q9NUV9 329 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 PCDHB8Q9UN66 801 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 CFAP20Q9Y6A4 193 aaKnown RBP12.51□□□□□ -0.41
SNX1-201ENST00000261889 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
SNX1-201ENST00000261889 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
SNX1-201ENST00000261889 KDELR3O43731 214 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms