RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 UBXN8O00124 270 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 COPEO14579 308 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 SUPT3HO75486 399 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 STK16O75716 305 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 PYGBP11216 843 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 GRK3P35626 688 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 DLSTP36957 453 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 GCGRP47871 477 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 RPS15AP62244 130 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 CXADRP78310 365 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 VAC14Q08AM6 782 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 FAM214AQ32MH5 1076 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 FBXO48Q5FWF7 155 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 SH2D5Q6ZV89 423 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 RERGQ96A58 199 aaPredicted RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 ESAMQ96AP7 390 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 CRELD1Q96HD1 420 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 TSNARE1Q96NA8 513 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 DPH2Q9BQC3 489 aaPredicted RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 CADM1Q9BY67 442 aaKnown RBP16■□□□□ 0.15
SDCBP-201ENST00000260130 SYNPO2LQ9H987 977 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 STOML1Q9UBI4 398 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 ANKRD12Q6UB98 2062 aa16■□□□□ 0.15
SDCBP-201ENST00000260130 KCNE1BA0A087WTH5 132 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 K7ENP7 123 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 GYG2O15488 501 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 SMNDC1O75940 238 aaKnown RBP eCLIP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 MTHFD2P13995 350 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 WT1P19544 449 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ATP6V1C1P21283 382 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 AGXTP21549 392 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ALAS2P22557 587 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 HSPA7P48741 367 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CATSPEREQ5SY80 951 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 YOD1Q5VVQ6 348 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 INO80CQ6PI98 192 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 TTLL10Q6ZVT0 673 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 PROKR1Q8TCW9 393 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CT55Q8WUE5 264 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CHST8Q9H2A9 424 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 KCNK13Q9HB14 408 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CUTCQ9NTM9 273 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ARL8BQ9NVJ2 186 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 IL17BQ9UHF5 180 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 HYKKA2RU49 373 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 C21orf140B9A014 251 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 TERTO14746 1132 aaKnown RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ENTPD5O75356 428 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 RBP1P09455 135 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 SPTBP11277 2137 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 BGNP21810 368 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 F8A1P23610 371 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 SERPINB3P29508 390 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 SERPINB4P48594 390 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 PTDSS1P48651 473 aaKnown RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 COL9A2Q14055 689 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 TECRLQ5HYJ1 363 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 C1orf189Q5VU69 101 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 FAM91A1Q658Y4 838 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ZNF385CQ66K41 422 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 LCN10Q6JVE6 187 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CSNK1A1LQ8N752 337 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ZSCAN1Q8NBB4 408 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 THAP11Q96EK4 314 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 SLC45A3Q96JT2 553 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 GBP5Q96PP8 586 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 CD244Q9BZW8 370 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 MMADHCQ9H3L0 296 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-201ENST00000260130 PRORYQ9H606 182 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 DNAJC11Q9NVH1 559 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 KCND3Q9UK17 655 aa15.99■□□□□ 0.15
SDCBP-201ENST00000260130 ITPR1Q14643 2758 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 FEZF1A0PJY2 475 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 H0Y3Z8 333 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 TXNDC9O14530 226 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 GSC2O15499 205 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 PAX7P23759 505 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 CDC16Q13042 620 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 DNASE1L3Q13609 305 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 PRTGQ2VWP7 1150 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 ARHGAP40Q5TG30 622 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 NXPE4Q6UWF7 544 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 ARHGAP24Q8N264 748 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 SNRNP27Q8WVK2 155 aaKnown RBP15.98■□□□□ 0.15
SDCBP-201ENST00000260130 MCUR1Q96AQ8 359 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 SARGQ9BW04 601 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 GPR87Q9BY21 358 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 PELI2Q9HAT8 420 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 PCDHGA6Q9Y5G7 932 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 PCDHGA4Q9Y5G9 962 aa15.98■□□□□ 0.15
SDCBP-201ENST00000260130 A0A1B0GX78 115 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 LCMT2O60294 686 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 ESRRAP11474 423 aaPredicted RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 ACADSP16219 412 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 GCKP35557 465 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 EMP3P54852 163 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 DCDP81605 110 aaKnown RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 MEF2AQ02078 507 aaPredicted RBP15.97■□□□□ 0.15
SDCBP-201ENST00000260130 ATG16L1Q676U5 607 aa15.97■□□□□ 0.15
SDCBP-201ENST00000260130 TMPRSS11BQ86T26 416 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms