RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FAM214AQ32MH5 1076 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 SAXO2Q658L1 398 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 SELENOMQ8WWX9 145 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 PSKH2Q96QS6 385 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 DPH2Q9BQC3 489 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 APOL5Q9BWW9 433 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 PRRG3Q9BZD7 231 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 TMEM184CQ9NVA4 438 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 TTC3P53804 2025 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 ADM5C9JUS6 153 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 PDPK1O15530 556 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 LRATO95237 230 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 CYP2A6P11509 494 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 PRPS1L1P21108 318 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 DGKAP23743 735 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 TACR1P25103 407 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 HOXD10P28358 340 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 UQCRC1P31930 480 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 CPSF6Q16630 551 aaKnown RBP eCLIP11.09□□□□□ -0.63
TROAP-201ENST00000257909 TATDN3Q17R31 274 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 LCN1P1Q5VSP4 162 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 PTRHD1Q6GMV3 140 aaKnown RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 CIR1Q86X95 450 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 C1orf52Q8N6N3 182 aaKnown RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 TTC16Q8NEE8 873 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 OR4C15Q8NGM1 316 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 VANGL1Q8TAA9 524 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 SPPL2AQ8TCT8 520 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 ZC3HAV1LQ96H79 300 aaKnown RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 SPATA17Q96L03 361 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 NIPSNAP1Q9BPW8 284 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 MAPKAP1Q9BPZ7 522 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 CINPQ9BW66 212 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 MCOLN1Q9GZU1 580 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 NARFLQ9H6Q4 476 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 NDUFAF4Q9P032 175 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 GABRQQ9UN88 632 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 SSR3Q9UNL2 185 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 CORO2BQ9UQ03 480 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 SCML2Q9UQR0 700 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 FNDC3AQ9Y2H6 1198 aaKnown RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 DNAH12Q6ZR08 3092 aa11.09□□□□□ -0.63
TROAP-201ENST00000257909 NUP214P35658 2090 aaPredicted RBP11.09□□□□□ -0.63
TROAP-201ENST00000257909 HYKKA2RU49 373 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PRMT3O60678 531 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 STK16O75716 305 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PRLP01236 227 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CSF2P04141 144 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 ACADMP11310 421 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PSKH1P11801 424 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
TROAP-201ENST00000257909 CRYBB2P43320 205 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 AFF1P51825 1210 aaKnown RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 RAB25P57735 213 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 SELENOWP63302 87 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 TAGLNQ01995 201 aaKnown RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 CACNG1Q06432 222 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CACNB2Q08289 660 aaPredicted RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 DSC3Q14574 896 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 TEAD4Q15561 434 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PAMR1Q6UXH9 720 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 HSDL2Q6YN16 418 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CERS6Q6ZMG9 384 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 GLRX5Q86SX6 157 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 LGI4Q8N135 537 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CAMKK1Q8N5S9 505 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 OR4M1Q8NGD0 313 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 OR9Q1Q8NGQ5 310 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CSGALNACT1Q8TDX6 532 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 SLC25A46Q96AG3 418 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 OMA1Q96E52 524 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 DIRAS2Q96HU8 199 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 MSLNLQ96KJ4 702 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PAAF1Q9BRP4 392 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 HTATIP2Q9BUP3 242 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CIPCQ9C0C6 399 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 BPIFA1Q9NP55 256 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 ABCB9Q9NP78 766 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 RLIMQ9NVW2 624 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 FAM120CQ9NX05 1096 aaKnown RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 CPA4Q9UI42 421 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 OR5K3A6NET4 321 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 NPIPB8E9PQR5 432 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PLA2G10O15496 165 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 F2P00734 622 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 IL1AP01583 271 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 C1QCP02747 245 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CYP17A1P05093 508 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 TSPAN19P0C672 248 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 ZNF7P17097 686 aaPredicted RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 EFEMP1Q12805 493 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PTGES3Q15185 160 aaKnown RBP11.08□□□□□ -0.64
TROAP-201ENST00000257909 MZT2BQ6NZ67 158 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 PTCHD4Q6ZW05 846 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 CREB3L4Q8TEY5 395 aa11.08□□□□□ -0.64
TROAP-201ENST00000257909 ADGRE3Q9BY15 652 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms