RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 LAPTM4BQ86VI4 370 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 SLC7A6Q92536 515 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 ASB8Q9H765 288 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 HCSTQ9UBK5 93 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 GTF2IRD1Q9UHL9 959 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 PCDHA9Q9Y5H5 950 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 METTL15A6NJ78 407 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 MID1O15344 667 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 SERPIND1P05546 499 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 PKMP14618 531 aaKnown RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 EPB42P16452 691 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 GGT1P19440 569 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 SDC2P34741 201 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 ATP5C1P36542 298 aaKnown RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 ZXDBP98169 803 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 POM121L1PQ3SYA9 428 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 IQCCQ4KMZ1 466 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 KIF18BQ86Y91 864 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 UBQLNLQ8IYU4 475 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 VWA5B2Q8N398 1253 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 NKAPQ8N5F7 415 aaKnown RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 OR4F6Q8NGB9 312 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 HMGCLL1Q8TB92 370 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 RAI2Q9Y5P3 530 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 A0A0G2JPF8 293 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 HNRNPCL3B7ZW38 293 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 PITPNM1O00562 1244 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 DNAJB5O75953 348 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 HRGP04196 525 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 ZNF865P0CJ78 1059 aaPredicted RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 HNRNPCL4P0DMR1 293 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 FPR1P21462 350 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 SEMA3BQ13214 749 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 BOP1Q14137 746 aaKnown RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 DPY19L1Q2PZI1 675 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 TOR2AQ5JU69 321 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 MS4A4AQ96JQ5 239 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 AIFM2Q9BRQ8 373 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 GTPBP2Q9BX10 602 aaKnown RBP12.87□□□□□ -0.35
CCDC117-201ENST00000249064 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 GALNT9Q9HCQ5 603 aa12.87□□□□□ -0.35
CCDC117-201ENST00000249064 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ADAMDEC1O15204 470 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ALPIP09923 528 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 LPOP22079 712 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 GKP32189 559 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 OR1D2P34982 312 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ACSM2AQ08AH3 577 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 SLC9A5Q14940 896 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 MAD2L1BPQ15013 274 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ACSM2BQ68CK6 577 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 DNAJB7Q7Z6W7 309 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 IL17RDQ8NFM7 739 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 MED8Q96G25 268 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 RDH12Q96NR8 316 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 UHRF1Q96T88 793 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ARHGAP39Q9C0H5 1083 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 SLIRPQ9GZT3 109 aaKnown RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 FCF1Q9Y324 198 aaKnown RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 PTHP01270 115 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ENGP17813 658 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ITPKAP23677 461 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ATP13A5Q4VNC0 1218 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 MTFR2Q6P444 385 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 CEP68Q76N32 757 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 LSMEM1Q8N8F7 131 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 AP3S1Q92572 193 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ZNF419Q96HQ0 510 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 TSGA13Q96PP4 275 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 C17orf62Q9BQA9 187 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 RBCK1Q9BYM8 510 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 C11orf54Q9H0W9 315 aaPredicted RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 TMEM138Q9NPI0 162 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 CLIC1O00299 241 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 EEDO75530 441 aaKnown RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ALDH9A1P49189 494 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 GTF2H2Q13888 395 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 GTF2H2CQ6P1K8 395 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 NELL1Q92832 810 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 IMP4Q96G21 291 aaKnown RBP12.86□□□□□ -0.35
CCDC117-201ENST00000249064 C12orf66Q96MD2 445 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 PKP4Q99569 1192 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 TTLL2Q9BWV7 592 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 REV1Q9UBZ9 1251 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 MUTYHQ9UIF7 546 aa12.86□□□□□ -0.35
CCDC117-201ENST00000249064 MAP4K5Q9Y4K4 846 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms