RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.4■■□□□ 1.184e-8■■■■■ 80.4
SYNGR3-201ENST00000248121 FERD3LQ96RJ6 166 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 TBCDQ9BTW9 1192 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 BATF3Q9NR55 127 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 SPATA7Q9P0W8 599 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 TBC1D29Q9UFV1 150 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 TSC22D4Q9Y3Q8 395 aa22.4■■□□□ 1.18
SYNGR3-201ENST00000248121 PCDH7O60245 1069 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 RASGRP1O95267 797 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 TBX6O95947 436 aaPredicted RBP22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 UBTFL6P0CB48 400 aaPredicted RBP22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 CKMT2P17540 419 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 HTR1BP28222 390 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 HSD17B2P37059 387 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 SRP54P61011 504 aaKnown RBP22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 CWF19L1Q69YN2 538 aaKnown RBP22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 TMIGD1Q6UXZ0 262 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 NELL1Q92832 810 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 GBP5Q96PP8 586 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 V9GYQ6 96 aa22.39■■□□□ 1.17
SYNGR3-201ENST00000248121 C7orf72A4D263 438 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 PDZK1P1A8MUH7 402 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 GBAP04062 536 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 PIK3CBP42338 1070 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 RPS9P46781 194 aaKnown RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 MED21Q13503 144 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 NRF1Q16656 503 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 DUOXA1Q1HG43 343 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 CLECL1Q8IZS7 167 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 WDR48Q8TAF3 677 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 SMPDL3AQ92484 453 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 GORASP2Q9H8Y8 452 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 PRM3Q9NNZ6 103 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 SNRNP200O75643 2136 aaKnown RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 LAMA1P25391 3075 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 ANXA6P08133 673 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 CELA2BP08218 269 aaPredicted RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 BCKDHBP21953 392 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 ASMTP46597 345 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 MRPS35P82673 323 aaKnown RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 SLC30A9Q6PML9 568 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 TSSK4Q6SA08 328 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 C17orf64Q86WR6 236 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 EPHX4Q8IUS5 362 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 WASH6PQ9NQA3 447 aa22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 FAM120CQ9NX05 1096 aaKnown RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 TP53BP1Q12888 1972 aaPredicted RBP22.38■■□□□ 1.17
SYNGR3-201ENST00000248121 GNG14A0A1W2PPG7 69 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 ELOVL7A1L3X0 281 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 DENRO43583 198 aaKnown RBP22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 IDSP22304 550 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 FASP25445 335 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 TRPC1P48995 793 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 POLE2P56282 527 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 YPEL5P62699 121 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 EIF2B5Q13144 721 aaKnown RBP22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 CAMKMTQ7Z624 323 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 NRROSQ86YC3 692 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 ABHD11Q8NFV4 315 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 FIG4Q92562 907 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 CAMK1GQ96NX5 476 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 SEPHS2Q99611 448 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 CENPKQ9BS16 269 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 DLGAP2Q9P1A6 1054 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 AP4B1Q9Y6B7 739 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 TXNDC9O14530 226 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 MT-ND1P03886 318 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 WNT1P04628 370 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 LYNP07948 512 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 THEGLP0DJG4 465 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 EFNA1P20827 205 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 RABIFP47224 123 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 CCT8P50990 548 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 ZXDAP98168 799 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 TMEM154Q6P9G4 183 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 SFTPA2Q8IWL1 248 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 MICU2Q8IYU8 434 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 METTL4Q8N3J2 472 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 FAM86B1Q8N7N1 296 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 ANKRD53Q8N9V6 530 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 JPH3Q8WXH2 748 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 UBE2E3Q969T4 207 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 SH3KBP1Q96B97 665 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 PANX1Q96RD7 426 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 DUSP26Q9BV47 211 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 XKR8Q9H6D3 395 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 PELI2Q9HAT8 420 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 GPR27Q9NS67 375 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 RAB26Q9ULW5 256 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 DMTF1Q9Y222 760 aa22.37■■□□□ 1.17
SYNGR3-201ENST00000248121 TECTAO75443 2155 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 SDK1Q7Z5N4 2213 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 MAGEA13PA6NCF6 341 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 FAM220BPB1ANY3 271 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 SOCS2O14508 198 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 ZNF763Q0D2J5 394 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 UAP1L1Q3KQV9 507 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 KRT78Q8N1N4 520 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 COQ8BQ96D53 544 aa22.36■■□□□ 1.17
SYNGR3-201ENST00000248121 ZNF597Q96LX8 424 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms