RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 UBE3DQ7Z6J8 389 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 CSNK1A1LQ8N752 337 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 AGBL5Q8NDL9 886 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 REPS1Q96D71 796 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 CTRCQ99895 268 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 SORBS1Q9BX66 1292 aaKnown RBP19.2■□□□□ 0.66
SNRPA-201ENST00000243563 SLC6A16Q9GZN6 736 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 WDR55Q9H6Y2 383 aaPredicted RBP19.2■□□□□ 0.66
SNRPA-201ENST00000243563 KCNK13Q9HB14 408 aa19.2■□□□□ 0.66
SNRPA-201ENST00000243563 A0A0G2JN53 185 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 SDHDO14521 159 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 HDAC3O15379 428 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 CLEC3AO75596 197 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 CSTF2P33240 577 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNRPA-201ENST00000243563 FOXM1Q08050 763 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 TARDBPQ13148 414 aaKnown RBP eCLIP19.19■□□□□ 0.66
SNRPA-201ENST00000243563 TOR1AIP1Q5JTV8 583 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 TRIM46Q7Z4K8 759 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 ZCCHC10Q8TBK6 192 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 NT5CQ8TCD5 201 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 ADAMTS14Q8WXS8 1223 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 THAP11Q96EK4 314 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 C19orf60Q96EN9 201 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 DEPDC7Q96QD5 511 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 EBF4Q9BQW3 602 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 LHX9Q9NQ69 397 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 LOXL2Q9Y4K0 774 aa19.19■□□□□ 0.66
SNRPA-201ENST00000243563 LRIT2A6NDA9 550 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 FOXE1O00358 373 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 RTCAO00442 366 aaKnown RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 MSL3P1P0C860 447 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 ALOX15P16050 662 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 GCGRP47871 477 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 ADPRMQ3LIE5 342 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 TMTC4Q5T4D3 741 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 RNF165Q6ZSG1 346 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 PRSS41Q7RTY9 318 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 CHCHD4Q8N4Q1 142 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 TBC1D19Q8N5T2 526 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 RERGQ96A58 199 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 MS4A6EQ96DS6 147 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 LIN37Q96GY3 246 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 C10orf90Q96M02 699 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 MRPL1Q9BYD6 325 aaKnown RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 FAM107BQ9H098 131 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 DCTN4Q9UJW0 460 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 SLC12A4Q9UP95 1085 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 GOLGA8QA0A0J9YX86 632 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 SERTM1A2A2V5 107 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 GOLGA8OA6NCC3 632 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 GMNCA6NCL1 334 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 GOLGA8NF8WBI6 632 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 SERPINA6P08185 405 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 CDK4P11802 303 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 EPHA3P29320 983 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 HK2P52789 917 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 AQP5P55064 265 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 KHDRBS2Q5VWX1 349 aaKnown RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 ZNF655Q8N720 491 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 AMER3Q8N944 861 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 TRPV3Q8NET8 790 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 TTLQ8NG68 377 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 APIPQ96GX9 242 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 OR52B2Q96RD2 323 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 ZNF717Q9BY31 904 aaPredicted RBP19.18■□□□□ 0.66
SNRPA-201ENST00000243563 MEAF6Q9HAF1 191 aa19.18■□□□□ 0.66
SNRPA-201ENST00000243563 SRPX2O60687 465 aaPredicted RBP19.17■□□□□ 0.66
SNRPA-201ENST00000243563 OR2B3O76000 313 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 CHEK2O96017 543 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 RAB8AP61006 207 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 TBL3Q12788 808 aaKnown RBP19.17■□□□□ 0.66
SNRPA-201ENST00000243563 CSTF3Q12996 717 aaKnown RBP19.17■□□□□ 0.66
SNRPA-201ENST00000243563 PWP1Q13610 501 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 EPGNQ6UW88 154 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 RIPOR1Q6ZS17 1223 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 RAB11FIP2Q7L804 512 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 UTP15Q8TED0 518 aaKnown RBP19.17■□□□□ 0.66
SNRPA-201ENST00000243563 CMTM7Q96FZ5 175 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 FAR2Q96K12 515 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 BRF2Q9HAW0 419 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 PRM3Q9NNZ6 103 aa19.17■□□□□ 0.66
SNRPA-201ENST00000243563 FITM1A5D6W6 292 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 PLPP1O14494 284 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 LSM1O15116 133 aaKnown RBP19.16■□□□□ 0.66
SNRPA-201ENST00000243563 MAP3K7O43318 606 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 DNAJB6O75190 326 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 SLC35G6P0C7Q6 338 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 ZNF888P0CJ79 500 aaPredicted RBP19.16■□□□□ 0.66
SNRPA-201ENST00000243563 IDH3AP50213 366 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 MC2RQ01718 297 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 ACY1Q03154 408 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 DEPDC1Q5TB30 811 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 PWWP2BQ6NUJ5 590 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 TMEM214Q6NUQ4 689 aaKnown RBP19.16■□□□□ 0.66
SNRPA-201ENST00000243563 MTERF4Q7Z6M4 381 aaKnown RBP19.16■□□□□ 0.66
SNRPA-201ENST00000243563 PDSS2Q86YH6 399 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 CAMKVQ8NCB2 501 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 N4BP2L2Q92802 583 aaPredicted RBP19.16■□□□□ 0.66
SNRPA-201ENST00000243563 STRADBQ9C0K7 418 aa19.16■□□□□ 0.66
SNRPA-201ENST00000243563 AKTIPQ9H8T0 292 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms