RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 PRKAR1AP10644 381 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PRKCAP17252 672 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 HOXB6P17509 224 aaKnown RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 CYBRD1Q53TN4 286 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PHF19Q5T6S3 580 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ZNF852Q6ZMS4 543 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 FAM129CQ86XR2 697 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ZCCHC10Q8TBK6 192 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MSANTD3Q96H12 275 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 RBM18Q96H35 190 aaKnown RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 CASD1Q96PB1 797 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SLC30A2Q9BRI3 323 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 DERL2Q9GZP9 239 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MRTO4Q9UKD2 239 aaKnown RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 SPATA2Q9UM82 520 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CYP8B1Q9UNU6 501 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ANGPT4Q9Y264 503 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CFL2Q9Y281 166 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SLC25A12O75746 678 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 OR2B3O76000 313 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 HSD17B1P14061 328 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ETV3P41162 512 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 ATP4BP51164 291 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 NTHL1P78549 312 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PTPRCAPQ14761 206 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SPRED1Q7Z699 444 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 LRRTM4Q86VH4 590 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 AVL9Q8NBF6 648 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 OR5K1Q8NHB7 308 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SLC22A18Q96BI1 424 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PRRG4Q9BZD6 226 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 USP3Q9Y6I4 520 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 XPNPEP2O43895 674 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MTX2O75431 263 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MAP2K4P45985 399 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 RUNX3Q13761 415 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 FAM26DQ5JW98 314 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 LRRC66Q68CR7 880 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 ZNF57Q68EA5 555 aaPredicted RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 PAQR9Q6ZVX9 377 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 LYSMD2Q8IV50 215 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 KCNJ9Q92806 393 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MUL1Q969V5 352 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 KIAA1191Q96A73 305 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 FRMD6Q96NE9 622 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 TRNT1Q96Q11 434 aaKnown RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 DPYSL5Q9BPU6 564 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 EXD2Q9NVH0 621 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 FAM118AQ9NWS6 357 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 C1orf109Q9NX04 203 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SUSD2Q9UGT4 822 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 IKZF3Q9UKT9 509 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 BAIAP2Q9UQB8 552 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 FAM240BA0A1B0GVZ2 78 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CCNYL3P0C7X3 344 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 EPCAMP16422 314 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 RPL6Q02878 288 aaKnown RBP10.64□□□□□ -0.71
COPA-201ENST00000241704 CYP4F3Q08477 520 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 KCNAB2Q13303 367 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 DSC3Q14574 896 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CLCA4Q14CN2 919 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 TIGD6Q17RP2 521 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 TCEAL8Q8IYN2 117 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 CLDN19Q8N6F1 224 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MOCOSQ96EN8 888 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 RAB11FIP5Q9BXF6 653 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 PCBD2Q9H0N5 130 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 POPDC3Q9HBV1 291 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 DUSP12Q9UNI6 340 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 MAU2Q9Y6X3 613 aa10.64□□□□□ -0.71
COPA-201ENST00000241704 SLITRK5O94991 958 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 ADH1BP00325 375 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 ANXA4P09525 319 aaPredicted RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 POLR2CP19387 275 aaPredicted RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 PAICSP22234 425 aaKnown RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 GMPRP36959 345 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 DPP6P42658 865 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 CLCNKAP51800 687 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 AP1S2P56377 157 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 ABATP80404 500 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 STEAP3Q658P3 488 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 EIF3MQ7L2H7 374 aaKnown RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 LMX1AQ8TE12 382 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 UHRF1Q96T88 793 aaPredicted RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 SMURF2Q9HAU4 748 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 MTMR10Q9NXD2 777 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 MRPL39Q9NYK5 338 aaKnown RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 ABI3Q9P2A4 366 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 PCDH10Q9P2E7 1040 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 ERVK-18Q9QC07 812 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 RNF6Q9Y252 685 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 PCDHGB6Q9Y5F9 930 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 CDC7O00311 574 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 POLR1CO15160 346 aaPredicted RBP10.63□□□□□ -0.71
COPA-201ENST00000241704 JRKO75564 520 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 CBSLP0DN79 551 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 TCF3P15923 654 aa10.63□□□□□ -0.71
COPA-201ENST00000241704 NT5EP21589 574 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms