RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 SSR2P43308 183 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GNA13Q14344 377 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 OTUD1Q5VV17 481 aaPredicted RBP10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GDF6Q6KF10 455 aaPredicted RBP10.65□□□□□ -0.7
CCDC170-201ENST00000239374 ELMSAN1Q6PJG2 1045 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 ARRDC2Q8TBH0 407 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 PRDM8Q9NQV8 689 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GSAPA4D1B5 854 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GABARAPO95166 117 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 OR5F1O95221 314 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 CPNE6O95741 557 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 BCHEP06276 602 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 STAT5AP42229 794 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 SF3B4Q15427 424 aaKnown RBP eCLIP10.65□□□□□ -0.7
CCDC170-201ENST00000239374 SPHARQ15513 63 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 RAB41Q5JT25 222 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 STEAP3Q658P3 488 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GPR149Q86SP6 731 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 THOC6Q86W42 341 aaKnown RBP10.65□□□□□ -0.7
CCDC170-201ENST00000239374 C17orf64Q86WR6 236 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 NXPE1Q8N323 547 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 ABCB8Q9NUT2 735 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 FAM92AA1XBS5 289 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 PCP4L1A6NKN8 68 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 GABRR2P28476 465 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 MTAPQ13126 283 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.65□□□□□ -0.7
CCDC170-201ENST00000239374 AGAP6Q5VW22 663 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 KIAA1161Q6NSJ0 714 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 SPATC1Q76KD6 591 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 RNF130Q86XS8 419 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 SLC22A15Q8IZD6 547 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 METTL4Q8N3J2 472 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 AGAP4Q96P64 663 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 IL1RAPQ9NPH3 570 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 TMEM45AQ9NWC5 275 aa10.65□□□□□ -0.7
CCDC170-201ENST00000239374 LOC285095A0A1B0GVY8 99 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SOCS7O14512 581 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 RPS3P23396 243 aaKnown RBP eCLIP10.64□□□□□ -0.712e-8■■■■■ 55.7
CCDC170-201ENST00000239374 RCVRNP35243 200 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CXCR4P61073 352 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SLBPQ14493 270 aaKnown RBP eCLIP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 UAP1L1Q3KQV9 507 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 C9orf64Q5T6V5 341 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ZDHHC20Q5W0Z9 365 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 IKBIPQ70UQ0 350 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CCDC28AQ8IWP9 274 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 C7orf57Q8NEG2 295 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 NEURL2Q9BR09 285 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 NUFIP1Q9UHK0 495 aaKnown RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 PCDHB11Q9Y5F2 797 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MYO10Q9HD67 2058 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ARFGEF1Q9Y6D6 1849 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ZSCAN5BA6NJL1 495 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CENPBD1B2RD01 187 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 HTR2BP41595 481 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 NDUFAF6Q330K2 333 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ANKRD34AQ69YU3 496 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CEACAM20Q6UY09 585 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 Q6ZPB1 254 aaPredicted RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 PRR23CQ6ZRP0 262 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 GHDCQ8N2G8 530 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 BEND7Q8N7W2 519 aaPredicted RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MRPL48Q96GC5 212 aaKnown RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CCM2Q9BSQ5 444 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CCDC32Q9BV29 185 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ZNF717Q9BY31 904 aaPredicted RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 AMBRA1Q9C0C7 1298 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CTDSP2O14595 271 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SULT1C4O75897 302 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 PCDH8O95206 1070 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 RPN2P04844 631 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ATXN1LP0C7T5 689 aaKnown RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ITGAMP11215 1152 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MTHFD2P13995 350 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 LGALS3BPQ08380 585 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 IRAK1BP1Q5VVH5 260 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 LRRC66Q68CR7 880 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MEIOBQ8N635 442 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SLC43A3Q8NBI5 491 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 AP2M1Q96CW1 435 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 APIPQ96GX9 242 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MMP28Q9H239 520 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 OR51B5Q9H339 312 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 TMEM138Q9NPI0 162 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 EVPLQ92817 2033 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 MROH6A6NGR9 719 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 ISM1B1AKI9 464 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 E2F3O00716 465 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CNMDO75829 334 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 KLK1P06870 262 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 RPS13P62277 151 aaKnown RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SNRPD2P62316 118 aaKnown RBP10.64□□□□□ -0.71
CCDC170-201ENST00000239374 NFE2L1Q14494 772 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 SPIN4Q56A73 249 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 CPZQ66K79 652 aa10.64□□□□□ -0.71
CCDC170-201ENST00000239374 C22orf42Q6IC83 251 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms