RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 ANKDD1BA6NHY2 528 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 COPEO14579 308 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 UGDHO60701 494 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 ONECUT2O95948 504 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 MTHFD2P13995 350 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 SERPINB1P30740 379 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 BCL6P41182 706 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 SCTRP47872 440 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 NAA20P61599 178 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 OCA2Q04671 838 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 NAA30Q147X3 362 aaPredicted RBP10.74□□□□□ -0.69
SF3B6-201ENST00000233468 HERC3Q15034 1050 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 NCF4Q15080 339 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 CCDC153Q494R4 210 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 C1orf189Q5VU69 101 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 MLIPQ5VWP3 458 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 SLCO4C1Q6ZQN7 724 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 ABHD13Q7L211 337 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 PLD3Q8IV08 490 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 SLC22A9Q8IVM8 553 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 PTGR2Q8N8N7 351 aaPredicted RBP10.74□□□□□ -0.69
SF3B6-201ENST00000233468 EPS8L3Q8TE67 593 aaKnown RBP10.74□□□□□ -0.69
SF3B6-201ENST00000233468 STARD8Q92502 1023 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 ATP6V1E2Q96A05 226 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 FKBP10Q96AY3 582 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 REPS1Q96D71 796 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 VPS50Q96JG6 964 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 TMEM109Q9BVC6 243 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF304Q9HCX3 659 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 STARD5Q9NSY2 213 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 SENP1Q9P0U3 644 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 ADGRE2Q9UHX3 823 aa10.74□□□□□ -0.69
SF3B6-201ENST00000233468 RUVBL1Q9Y265 456 aaKnown RBP10.74□□□□□ -0.69
SF3B6-201ENST00000233468 A0A088AWK7 358 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 H0YIG0 161 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 NDUFS4O43181 175 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 NRP2O60462 931 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 CREG1O75629 220 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 IGHEP01854 428 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 SERPIND1P05546 499 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 KRT4P19013 534 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF10P21506 573 aaPredicted RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 FBLP22087 321 aaKnown RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 CRHR1P34998 444 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 GMPRP36959 345 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 HNF4AP41235 474 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 CASP2P42575 452 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 PHEXP78562 749 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 PCDH1Q08174 1060 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 TGM3Q08188 693 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 CHIT1Q13231 466 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 GTF2H2Q13888 395 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 SLBPQ14493 270 aaKnown RBP eCLIP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 TBR1Q16650 682 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 HKDC1Q2TB90 917 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 C18orf21Q32NC0 220 aaPredicted RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 LIPJQ5W064 366 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF385CQ66K41 422 aaPredicted RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 GTF2H2CQ6P1K8 395 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 FAM199XQ6PEV8 388 aaPredicted RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 LIAT1Q6ZQX7 453 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 TEX9Q8N6V9 391 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ENDOVQ8N8Q3 282 aaKnown RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 NT5CQ8TCD5 201 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 PPP4R1Q8TF05 950 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 MZB1Q8WU39 189 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ESAMQ96AP7 390 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 NACC2Q96BF6 587 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 TM4SF19Q96DZ7 209 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 PHF21BQ96EK2 531 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 WDR34Q96EX3 536 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 IP6K3Q96PC2 410 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ACTL8Q9H568 366 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 WDR54Q9H977 334 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 CLK4Q9HAZ1 481 aaKnown RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ANKHQ9HCJ1 492 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 ZNF358Q9NW07 568 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 GEMIN8Q9NWZ8 242 aaKnown RBP10.73□□□□□ -0.69
SF3B6-201ENST00000233468 COPG2Q9UBF2 871 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 IL17BQ9UHF5 180 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 LGALS13Q9UHV8 139 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 SH2B3Q9UQQ2 575 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 PLAAQ9Y263 795 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 STK38LQ9Y2H1 464 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 SLC22A7Q9Y694 548 aa10.73□□□□□ -0.69
SF3B6-201ENST00000233468 RELNP78509 3460 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 GOLGA8RI6L899 631 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 TERTO14746 1132 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 LCMT2O60294 686 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 CLEC3AO75596 197 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 NSA2O95478 260 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ITGB2P05107 769 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 CTSBP07858 339 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 SERPINA6P08185 405 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 MYZAPP0CAP1 466 aa10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ATP5F1P24539 256 aaPredicted RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 VARSP26640 1264 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 EEF1DP29692 281 aaKnown RBP10.72□□□□□ -0.69
SF3B6-201ENST00000233468 ARL1P40616 181 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms