RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 HMGA1P17096 107 aaKnown RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLC35A2P78381 396 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 VLDLRP98155 873 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZXDBP98169 803 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 MXD1Q05195 221 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 DBPQ10586 325 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAD2L1Q13257 205 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZNF648Q5T619 568 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CERS6Q6ZMG9 384 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ATG16L2Q8NAA4 619 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 C7orf57Q8NEG2 295 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 DEDD2Q8WXF8 326 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 VMP1Q96GC9 406 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 EBPLQ9BY08 206 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 KCNH6Q9H252 994 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ABCB9Q9NP78 766 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CRLS1Q9UJA2 301 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 PRAMEF4O60810 478 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ERN1O75460 977 aaKnown RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CLDN9O95484 217 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 HOXB9P17482 250 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 SDC1P18827 310 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ACRV1P26436 265 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ACVR2AP27037 513 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 RPIAP49247 311 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 LRRC26Q2I0M4 334 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ZNF181Q2M3W8 571 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 LRIF1Q5T3J3 769 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 PRAMEF9Q5VWM5 478 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 KLHL17Q6TDP4 642 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 Q6ZPB1 254 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ANKS3Q6ZW76 656 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CHST9Q7L1S5 443 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 SNX20Q7Z614 316 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CCDC71Q8IV32 467 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 IL17RDQ8NFM7 739 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 OR52E4Q8NGH9 312 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 FBLIM1Q8WUP2 373 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ST8SIA2Q92186 375 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 TP53INP1Q96A56 240 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 APOLD1Q96LR9 279 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 SIRT5Q9NXA8 310 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 ARL15Q9NXU5 204 aa9.08□□□□□ -0.96
HLA-DOA-201ENST00000229829 CIB4A0PJX0 185 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CCDC182A6NF36 153 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 IL7P13232 177 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CYP2A7P20853 494 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 HOXA9P31269 272 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 ETV3P41162 512 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CLDN8P56748 225 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TOP3AQ13472 1001 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 IL18R1Q13478 541 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 KRR1Q13601 381 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 SHQ1Q6PI26 577 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 GPR26Q8NDV2 337 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 DBF4BQ8NFT6 615 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MTERF3Q96E29 417 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 SLIRPQ9GZT3 109 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 DUSP21Q9H596 190 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAGIXQ9H6Y5 334 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMEM161AQ9NX61 479 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MALT1Q9UDY8 824 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TRPS1Q9UHF7 1281 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CLEC4EQ9ULY5 219 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 A0A096LPI6 279 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 GLYATL1P3A0A0U1RQE8 302 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MEIOCA2RUB1 952 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 RFXANKO14593 260 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 BNIP3LO60238 219 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 SH3BGRLO75368 114 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TRBC1P01850 177 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 FCER2P06734 321 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 GALTP07902 379 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 ITGALP20701 1170 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 DDCP20711 480 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 RPS3P23396 243 aaKnown RBP eCLIP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 IDH2P48735 452 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 ACLYP53396 1101 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLD1Q13393 1074 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TMEM132CQ8N3T6 1108 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 SKA2Q8WVK7 121 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TTPALQ9BTX7 342 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 BTBD2Q9BX70 525 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CWH43Q9H720 699 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 PDP1Q9P0J1 537 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 HCN4Q9Y3Q4 1203 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 OR51B4Q9Y5P0 310 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 PNMA8CA0A1B0GUJ8 204 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 PLK4O00444 970 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 YY2O15391 372 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 OR2B3O76000 313 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CCR7P32248 378 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MAGEA2P43356 314 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 ATN1P54259 1190 aaPredicted RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 HSPA14Q0VDF9 509 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 MRPL28Q13084 256 aaKnown RBP9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 CDKN3Q16667 212 aa9.07□□□□□ -0.96
HLA-DOA-201ENST00000229829 TCTN1Q2MV58 587 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms