RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 ACRV1P26436 265 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 ARPP19P56211 112 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 C21orf58P58505 322 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 SELENOWP63302 87 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 PCDH1Q08174 1060 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 C19orf57Q0VDD7 668 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 HYAL2Q12891 473 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 DUSP7Q16829 419 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 LGI4Q8N135 537 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 SPPL2AQ8TCT8 520 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 OPALINQ96PE5 141 aa13.48□□□□□ -0.25
SCNN1A-201ENST00000228916 A0A1W2PQ09 198 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 C1orf226A1L170 272 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 RGS5O15539 181 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ABCB1P08183 1280 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ALPIP09923 528 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 COX7A2P14406 83 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 CHMP24386 653 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 AQP1P29972 269 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 OR1G1P47890 313 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 RPIAP49247 311 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 GPAT3Q53EU6 434 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 FAM181AQ8N9Y4 354 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 JPH3Q8WXH2 748 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 MAL2Q969L2 176 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 MED30Q96HR3 178 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 HHATLQ9HCP6 504 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 RANGRFQ9HD47 186 aaPredicted RBP13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ACOXLQ9NUZ1 547 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ALPK3Q96L96 1907 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 PRAMEF4O60810 478 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 AKR1A1P14550 325 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ITGALP20701 1170 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ENDOUP21128 410 aaKnown RBP13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 SGSHP51688 502 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 PSPHP78330 225 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 ASAH1Q13510 395 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 DMC1Q14565 340 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 PRAMEF9Q5VWM5 478 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 FRG2Q64ET8 278 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 PLAG1Q6DJT9 500 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 NLRP8Q86W28 1048 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 FRG2BQ96QU4 278 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 WDR70Q9NW82 654 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 LHX3Q9UBR4 397 aa13.47□□□□□ -0.25
SCNN1A-201ENST00000228916 LAMA3Q16787 3333 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ERVH48-1M5A8F1 160 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 INPPL1O15357 1258 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 DUSP11O75319 330 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 IGHA2P01877 340 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 SCG5P05408 212 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 LAMP1P11279 417 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 HLA-EP13747 358 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ALDH9A1P49189 494 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 RGNQ15493 299 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 EXOC3L2Q2M3D2 409 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 LRRC66Q68CR7 880 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 GDPGP1Q6ZNW5 385 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 LAX1Q8IWV1 398 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 RDH10Q8IZV5 341 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ZFYVE19Q96K21 471 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 FYTTD1Q96QD9 318 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 CNPPD1Q9BV87 410 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 MMP28Q9H239 520 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 IL26Q9NPH9 171 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 CDH12P55289 794 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 P2RX3P56373 397 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ZXDBP98169 803 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 SPIBQ01892 262 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 DSC1Q08554 894 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ZNF177Q13360 481 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 TEAD4Q15561 434 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 LINGO4Q6UY18 593 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 OR52J3Q8NH60 311 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 WDR36Q8NI36 951 aaKnown RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 HTATIP2Q9BUP3 242 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 SLC22A4Q9H015 551 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 ABCB8Q9NUT2 735 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 CORO2BQ9UQ03 480 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
SCNN1A-201ENST00000228916 SEC14L5O43304 696 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 ALPPP05187 535 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 CBSLP0DN79 551 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 PIPP12273 146 aaPredicted RBP13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 TNFRSF1BP20333 461 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 PPIBP23284 216 aaKnown RBP13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 CBSP35520 551 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC6A12P48065 614 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 SLC11A2P49281 568 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 RORCP51449 518 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 CDC42P60953 191 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 RHAGQ02094 409 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 SCN1BQ07699 218 aa13.46□□□□□ -0.26
SCNN1A-201ENST00000228916 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms