RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 LACC1Q8IV20 430 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 PGBD5Q8N414 524 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 CELF5Q8N6W0 485 aaKnown RBP14.06□□□□□ -0.16
PRDM4-201ENST00000228437 MTMR14Q8NCE2 650 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 KNL1Q8NG31 2342 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 OR10T2Q8NGX3 314 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 RLIMQ9NVW2 624 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 CLCA2Q9UQC9 943 aa14.06□□□□□ -0.16
PRDM4-201ENST00000228437 DDNO94850 711 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CH25HO95992 272 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 ITGA2P17301 1181 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 TACR2P21452 398 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 RGRP47804 291 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 SPHARQ15513 63 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 SIGIRRQ6IA17 410 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 SMG7Q92540 1137 aaKnown RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 FBXO44Q9H4M3 255 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 ARNTLO00327 626 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 ANXA8P13928 327 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 PTGER3P43115 390 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 KEAP1Q14145 624 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 TAF1AQ15573 450 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CLEC12AQ5QGZ9 265 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 IDNKQ5T6J7 187 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CXCL17Q6UXB2 119 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 C10orf111Q8N326 155 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 AKAP1Q92667 903 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 SLA2Q9H6Q3 261 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CCSER2Q9H7U1 834 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CHURC1-FNTBB4DL54 471 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 TLR4O00206 839 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 APEX1P27695 318 aaKnown RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 GPC1P35052 558 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 TARDBPQ13148 414 aaKnown RBP eCLIP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 NAE1Q13564 534 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 PTCHD3Q3KNS1 767 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 LAIR1Q6GTX8 287 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 RBFAQ8N0V3 343 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 IQCF1Q8N6M8 205 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 ZNF557Q8N988 423 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 HDHD5Q9BXW7 423 aa14.05□□□□□ -0.16
PRDM4-201ENST00000228437 KIAA1522Q9P206 1035 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 DNMT3BQ9UBC3 853 aaKnown RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
PRDM4-201ENST00000228437 CYP17A1P05093 508 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ITGAMP11215 1152 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ETFAP13804 333 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 RPS19P39019 145 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 HOXC5Q00444 222 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 PRKCDQ05655 676 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 CDC20Q12834 499 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 GLB1LQ6UWU2 654 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 B3GLCTQ6Y288 498 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 SNX20Q7Z614 316 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 SLC7A6Q92536 515 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 RHBDF1Q96CC6 855 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 TBX5Q99593 518 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 RACGAP1Q9H0H5 632 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 GKN1Q9NS71 199 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 SIRT5Q9NXA8 310 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ATXN1LP0C7T5 689 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 LAMP1P11279 417 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 SDC2P34741 201 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 RASSF6Q6ZTQ3 369 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 VWA5B2Q8N398 1253 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ARRDC2Q8TBH0 407 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ARPC5LQ9BPX5 153 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 BCL7BQ9BQE9 202 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 HEBP1Q9NRV9 189 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 MRPL39Q9NYK5 338 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 CLEC2DQ9UHP7 191 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ADAMTS5Q9UNA0 930 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ANKRD66B4E2M5 251 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 M0R082 166 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 C1QCP02747 245 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 PRPS2P11908 318 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ACPPP15309 386 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 GALK2Q01415 458 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 DUOXA1Q1HG43 343 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 DNAJC22Q8N4W6 341 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 C1orf52Q8N6N3 182 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 OTUB1Q96FW1 271 aaPredicted RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 ZFYVE1Q9HBF4 777 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 SGK2Q9HBY8 427 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 WNT9AO14904 365 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 MYCP01106 439 aaPredicted RBP14.04□□□□□ -0.16
PRDM4-201ENST00000228437 IFNA14P01570 189 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 PARP15Q460N3 678 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 CD244Q9BZW8 370 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 POFUT2Q9Y2G5 429 aa14.04□□□□□ -0.16
PRDM4-201ENST00000228437 OR2AG2A6NM03 316 aa14.03□□□□□ -0.16
PRDM4-201ENST00000228437 OR7A17O14581 309 aa14.03□□□□□ -0.16
PRDM4-201ENST00000228437 SLC30A4O14863 429 aa14.03□□□□□ -0.16
PRDM4-201ENST00000228437 DSCR3O14972 297 aa14.03□□□□□ -0.16
PRDM4-201ENST00000228437 DHFRP00374 187 aa14.03□□□□□ -0.16
PRDM4-201ENST00000228437 NNMTP40261 264 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms