RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ATCAYQ86WG3 371 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 WDR36Q8NI36 951 aaKnown RBP13.6□□□□□ -0.23
SF1-201ENST00000227503 CD200R1Q8TD46 325 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 APOL5Q9BWW9 433 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 SLC7A5P2Q9GIP4 190 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 RNF121Q9H920 327 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 CFL2Q9Y281 166 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 CCL27Q9Y4X3 112 aa13.6□□□□□ -0.23
SF1-201ENST00000227503 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 GREB1Q4ZG55 1949 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 TRBV5-3A0A0A0MS03 114 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 C2orf81A6NN90 581 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 I3L521 148 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 SYN3O14994 580 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 ARHGEF9O43307 516 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 AOC2O75106 756 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 VPS26AO75436 327 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 EOMESO95936 686 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 GLUD1P00367 558 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 ZDHHC11BP0C7U3 371 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CD9P21926 228 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 GZMKP49863 264 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 SNTA1Q13424 505 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 ESCO2Q56NI9 601 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 MBOAT1Q6ZNC8 495 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 IDO2Q6ZQW0 420 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 RGL4Q8IZJ4 473 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CDC26Q8NHZ8 85 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 MAL2Q969L2 176 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 HRASLS5Q96KN8 279 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 NIPSNAP1Q9BPW8 284 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CINPQ9BW66 212 aaPredicted RBP13.59□□□□□ -0.23
SF1-201ENST00000227503 TMEM45AQ9NWC5 275 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CLEC2DQ9UHP7 191 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 TRMT6Q9UJA5 497 aaKnown RBP13.59□□□□□ -0.23
SF1-201ENST00000227503 ALG5Q9Y673 324 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CFAP20Q9Y6A4 193 aaKnown RBP13.59□□□□□ -0.23
SF1-201ENST00000227503 SNTNA6NMZ2 147 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 NT5C1B-RDH14C9J2C7 533 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 CST9Q5W186 159 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 OR4F3Q6IEY1 312 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 ZNF605Q86T29 641 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 RNF175Q8N4F7 328 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 SLC5A8Q8N695 610 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 TMEM203Q969S6 136 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 REPS1Q96D71 796 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 COL21A1Q96P44 957 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 PITX2Q99697 317 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 SPON2Q9BUD6 331 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 SLC22A4Q9H015 551 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 MCUBQ9NWR8 336 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 FKBPLQ9UIM3 349 aa13.59□□□□□ -0.23
SF1-201ENST00000227503 ZFP37Q9Y6Q3 630 aaPredicted RBP13.59□□□□□ -0.23
SF1-201ENST00000227503 GRXCR2A6NFK2 248 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 F11P03951 625 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 MC4RP32245 332 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 EVI2BP34910 448 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 GPC1P35052 558 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 OR1E2P47887 323 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 CAV3P56539 151 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 IL2P60568 153 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 SPDYE7PQ495Y7 208 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 FLYWCH1Q4VC44 716 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 SAXO2Q658L1 398 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 RSPO2Q6UXX9 243 aaPredicted RBP13.58□□□□□ -0.23
SF1-201ENST00000227503 ZSWIM9Q86XI8 627 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 VWA5B2Q8N398 1253 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 ENKURQ8TC29 256 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 FAM83DQ9H4H8 585 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 CLMPQ9H6B4 373 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 ASAH2Q9NR71 780 aa13.58□□□□□ -0.23
SF1-201ENST00000227503 SAMD4AQ9UPU9 718 aaKnown RBP13.58□□□□□ -0.23
SF1-201ENST00000227503 USP34Q70CQ2 3546 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 MTMR11A4FU01 709 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 TSPAN4O14817 238 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 PLA2G10O15496 165 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 KDELR3O43731 214 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 BCKDHAP12694 445 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
SF1-201ENST00000227503 RPS3P23396 243 aaKnown RBP eCLIP13.58□□□□□ -0.249e-7■□□□□ 8.9
SF1-201ENST00000227503 SLC9A3P48764 834 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 SCN1BQ07699 218 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 CDH18Q13634 790 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 USP39Q53GS9 565 aaKnown RBP13.58□□□□□ -0.24
SF1-201ENST00000227503 PYDC2Q56P42 97 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 ATG9BQ674R7 924 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 SLC24A5Q71RS6 500 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 OTOP2Q7RTS6 562 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 SLC51BQ86UW2 128 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 EFHBQ8N7U6 833 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 LPCAT1Q8NF37 534 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 OR9Q2Q8NGE9 314 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 MSANTD3Q96H12 275 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 SEPT5Q99719 369 aaPredicted RBP13.58□□□□□ -0.24
SF1-201ENST00000227503 ACAT2Q9BWD1 397 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 TTLL2Q9BWV7 592 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 GALNT9Q9HCQ5 603 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 ELOVL2Q9NXB9 296 aa13.58□□□□□ -0.24
SF1-201ENST00000227503 PPT2Q9UMR5 302 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms