RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 FAM210AQ96ND0 272 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CCM2Q9BSQ5 444 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GMEB1Q9Y692 573 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CFAP20Q9Y6A4 193 aaKnown RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 M0QX08 132 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 RGS10O43665 173 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 RHOP08100 348 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 PRIM2P49643 509 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CDH12P55289 794 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 TBPL1P62380 186 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 C2orf80Q0P641 193 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 CAMK2GQ13555 558 aaPredicted RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GANABQ14697 944 aaKnown RBP14.07□□□□□ -0.16
CNOT3-201ENST00000221232 MAPK11Q15759 364 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 TCEAL5Q5H9L2 206 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GRHL2Q6ISB3 625 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 LIPIQ6XZB0 460 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SPRED2Q7Z698 418 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ADCK1Q86TW2 530 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ANKRD13BQ86YJ7 626 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SYNPOQ8N3V7 929 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 TRAM1L1Q8N609 369 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 NFKBIDQ8NI38 313 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 DNASE1L2Q92874 299 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ZFYVE19Q96K21 471 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GPATCH2Q9NW75 528 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 ADPRHL2Q9NX46 363 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 GULP1Q9UBP9 304 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 SNX8Q9Y5X2 465 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 USP34Q70CQ2 3546 aa14.07□□□□□ -0.16
CNOT3-201ENST00000221232 TMEM247A6NEH6 219 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 EIF3FO00303 357 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ADH1AP07327 375 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 NLGN4XQ8N0W4 816 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 SLC5A8Q8N695 610 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 C7orf34Q96L11 122 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 MRGPRX3Q96LB0 322 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 HHIPQ96QV1 700 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 CEP44Q9C0F1 390 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 PAK6Q9NQU5 681 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 POLE4Q9NR33 117 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TBX21Q9UL17 535 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 SLC6A14Q9UN76 642 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TNFRSF11BO00300 401 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 NPC1O15118 1278 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 MOSPD3O75425 235 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 WBP4O75554 376 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF30P17039 623 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF8P17098 575 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TAS2R50P59544 299 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 CD300CQ08708 224 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 PRSS53Q2L4Q9 553 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 RGS21Q2M5E4 152 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 CAPN13Q6MZZ7 669 aaPredicted RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 MED27Q6P2C8 311 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ERICH5Q6P6B1 374 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TTC23LQ6PF05 361 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 COMMD6Q7Z4G1 85 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TSEN54Q7Z6J9 526 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 P2RY8Q86VZ1 359 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 P3H2Q8IVL5 708 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ENTHD1Q8IYW4 607 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TRUB1Q8WWH5 349 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 SLC35A5Q9BS91 424 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ZSCAN5AQ9BUG6 496 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 RC3H2Q9HBD1 1191 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 TRNAU1APQ9NX07 287 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 DAPK2Q9UIK4 370 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 NDRG4Q9ULP0 352 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 RANBP2P49792 3224 aaKnown RBP14.06□□□□□ -0.16
CNOT3-201ENST00000221232 SCN8AQ9UQD0 1980 aa14.06□□□□□ -0.16
CNOT3-201ENST00000221232 ABHD14A-ACY1A0A1B0GW23 586 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 WASH3PC4AMC7 463 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 JRKO75564 520 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C9P02748 559 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 NPPBP16860 134 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 IL1RNP18510 177 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 HNF4AP41235 474 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 SPIBQ01892 262 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ZC3H12BQ5HYM0 836 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 PRSS36Q5K4E3 855 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 SLCO4C1Q6ZQN7 724 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 PARS2Q7L3T8 475 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 PAGE2Q7Z2X7 111 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 GRASPQ7Z6J2 395 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RNF130Q86XS8 419 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 SFTPA1Q8IWL2 248 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 VN1R2Q8NFZ6 395 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 OR9Q2Q8NGE9 314 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 CHTF18Q8WVB6 975 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 LZICQ8WZA0 190 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 GTPBP3Q969Y2 492 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ACOT13Q9NPJ3 140 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 OGDHLQ9ULD0 1010 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TMEM98Q9Y2Y6 226 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 MICAL3Q7RTP6 2002 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms