RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CDK6Q00534 326 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 E2F1Q01094 437 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 NRG1Q02297 640 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 TUBB3Q13509 450 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ENPP2Q13822 863 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CARD16Q5EG05 197 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF433Q8N7K0 673 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 SETD7Q8WTS6 366 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 RAB7BQ96AH8 199 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PIWIL1Q96J94 861 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC35C2Q9NQQ7 365 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 IKZF2Q9UKS7 526 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PHF24Q9UPV7 400 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TIMM22Q9Y584 194 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MCM3APO60318 1980 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 DOCK5Q9H7D0 1870 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 H3BSA7 217 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 H7C2Y5 167 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 GPR25O00155 361 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 OR1F1O43749 312 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SCN2BO60939 215 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 CDK14O94921 469 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FGF4P08620 206 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 DUSP4Q13115 394 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 MYLK3Q32MK0 819 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TECRLQ5HYJ1 363 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 OGFOD2Q6N063 350 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC30A6Q6NXT4 461 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 RTL10Q7L3V2 364 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 HDDC3Q8N4P3 179 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SPERTQ8NA61 448 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 OR2T33Q8NG76 320 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ZNF431Q8TF32 576 aaPredicted RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC5A11Q8WWX8 675 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SMPDL3AQ92484 453 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC9A6Q92581 669 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 EXOSC8Q96B26 276 aaKnown RBP4.28□□□□□ -1.72
CHD9-201ENST00000219084 ARMC5Q96C12 935 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SLC2A13Q96QE2 648 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ALPK1Q96QP1 1244 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 KCNS3Q9BQ31 491 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 FBRSQ9HAH7 460 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 TRPV4Q9HBA0 871 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SMURF1Q9HCE7 757 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ACOT13Q9NPJ3 140 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 PIGVQ9NUD9 493 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 ARL5AQ9Y689 179 aa4.28□□□□□ -1.72
CHD9-201ENST00000219084 SBF2Q86WG5 1849 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ELOA3DA6NLF2 546 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 SCDO00767 359 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TREHO43280 583 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MT-CYBP00156 380 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 VIPP01282 170 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 DHRS4L1P0CG22 281 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 NCK1P16333 377 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 HK1P19367 917 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 RPS3P23396 243 aaKnown RBP eCLIP4.27□□□□□ -1.73
CHD9-201ENST00000219084 DPP6P42658 865 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SLC9A3P48764 834 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 EFR3AQ14156 821 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ELOA3BQ3SY89 546 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 METAP1DQ6UB28 335 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 MOB2Q70IA6 237 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SLC37A3Q8NCC5 494 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ELOA3Q8NG57 546 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR52J3Q8NH60 311 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FANK1Q8TC84 345 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 LCN9Q8WX39 176 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ZNF516Q92618 1163 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SGCDQ92629 289 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 IMP4Q96G21 291 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 ELL3Q9HB65 397 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 SERINC1Q9NRX5 453 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 TAS2R9Q9NYW1 312 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ANKRD36A6QL64 1941 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 A0A1W2PQ45 241 aaPredicted RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 A0A1W2PQY0 241 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 FAM149AA5PLN7 773 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR6C70A6NIJ9 312 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 WASHC1A8K0Z3 465 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 WASH3PC4AMC7 463 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 CDH11P55287 796 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 HSPB3Q12988 150 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 DSC3Q14574 896 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 ANKRD26P1Q6NSI1 321 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 NANOGP8Q6NSW7 305 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SLC27A4Q6P1M0 643 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SLC43A2Q8N370 569 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 DCAF4L2Q8NA75 395 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR52E4Q8NGH9 312 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 OR8J1Q8NGP2 316 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SHKBP1Q8TBC3 707 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 GFM1Q96RP9 751 aaKnown RBP4.27□□□□□ -1.73
CHD9-201ENST00000219084 TCEAL7Q9BRU2 100 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 SUV39H2Q9H5I1 410 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 REEP4Q9H6H4 257 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 NANOGQ9H9S0 305 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 UCKL1Q9NWZ5 548 aa4.27□□□□□ -1.73
CHD9-201ENST00000219084 MED31Q9Y3C7 131 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms