RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.81□□□□□ -0.36
SRP54-201ENST00000216774 AGTRAPQ6RW13 159 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 DPY19L3Q6ZPD9 716 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 SLC46A3Q7Z3Q1 461 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 NAGSQ8N159 534 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 DEPDC4Q8N2C3 294 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 DENND6BQ8NEG7 585 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 OR10G2Q8NGC3 310 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 OR4C15Q8NGM1 316 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 GOT1L1Q8NHS2 421 aaPredicted RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 PSMA8Q8TAA3 256 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 SPPL2AQ8TCT8 520 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 MRPS31Q92665 395 aaKnown RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 TIFAQ96CG3 184 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 HERC2P3Q9BVR0 1158 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 BHLHE41Q9C0J9 482 aaPredicted RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 NXF2Q9GZY0 626 aaKnown RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 STOX2Q9P2F5 926 aaPredicted RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 COQ9O75208 318 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 ETHE1O95571 254 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 ITGA2P17301 1181 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 AQP1P29972 269 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 C21orf33P30042 268 aaPredicted RBP12.81□□□□□ -0.36
SRP54-201ENST00000216774 SERPINB1P30740 379 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 MAPK9P45984 424 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 RBBP4Q09028 425 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 NAE1Q13564 534 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 SLC5A8Q8N695 610 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 KBTBD8Q8NFY9 601 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 OR4A15Q8NGL6 344 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 PROX1Q92786 737 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 GGHQ92820 318 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 FAM83DQ9H4H8 585 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 THSD1Q9NS62 852 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 ATP6V1HQ9UI12 483 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 SLC25A13Q9UJS0 675 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 TESMINQ9Y4I5 508 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 PCDHGA2Q9Y5H1 932 aa12.81□□□□□ -0.36
SRP54-201ENST00000216774 GRM6O15303 877 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 PCDH7O60245 1069 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 MTX2O75431 263 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 CXCL10P02778 98 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 CATP04040 527 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 RPLP0P05388 317 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 SRPRAP08240 638 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 GADD45AP24522 165 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 HOXD10P28358 340 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 GABRR2P28476 465 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 HLA-FP30511 346 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 TIA1P31483 386 aaKnown RBP eCLIP12.8□□□□□ -0.365e-9■■■■□ 19.7
SRP54-201ENST00000216774 SLC19A1P41440 591 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 MVDP53602 400 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 OLR1P78380 273 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 CYP4F8P98187 520 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 FCHO2Q0JRZ9 810 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 E2F2Q14209 437 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 EIF4HQ15056 248 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 SF1Q15637 639 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 IFI44LQ53G44 452 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 BRAT1Q6PJG6 821 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 ZNF605Q86T29 641 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 LYSMD2Q8IV50 215 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 CCDC103Q8IW40 242 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 HS6ST3Q8IZP7 471 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 OR7G3Q8NG95 312 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 OR56A3Q8NH54 315 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 ZNF675Q8TD23 568 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 PXYLP1Q8TE99 480 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 HPS1Q92902 700 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 MED8Q96G25 268 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 TMEM169Q96HH4 297 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 COL21A1Q96P44 957 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 OR4K3Q96R72 315 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 TMEM184CQ9NVA4 438 aa12.8□□□□□ -0.36
SRP54-201ENST00000216774 FAM32AQ9Y421 112 aaKnown RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 GPC6Q9Y625 555 aaPredicted RBP12.8□□□□□ -0.36
SRP54-201ENST00000216774 GNG14A0A1W2PPG7 69 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 TNFRSF21O75509 655 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 URODP06132 367 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 CYP2A6P11509 494 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 GABRB1P18505 474 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 CRATP43155 626 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 MAGEA10P43363 369 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 ZNF45Q02386 682 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 MAPK11Q15759 364 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 MICAQ29983 383 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 SYTL3Q4VX76 610 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 C10orf62Q5T681 223 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 GDPD4Q6W3E5 623 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 Q6ZPB1 254 aaPredicted RBP12.79□□□□□ -0.36
SRP54-201ENST00000216774 GAREM2Q75VX8 874 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 DSG4Q86SJ6 1040 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 CMTM8Q8IZV2 173 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 HUS1BQ8NHY5 278 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 CRELD1Q96HD1 420 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 HEPHQ9BQS7 1158 aa12.79□□□□□ -0.36
SRP54-201ENST00000216774 RAD18Q9NS91 495 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms