RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 SRRDQ9UH36 339 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 SAMD4AQ9UPU9 718 aaKnown RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 TMEM98Q9Y2Y6 226 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 FAM32AQ9Y421 112 aaKnown RBP14.54□□□□□ -0.08
EFNB1-201ENST00000204961 OR51B4Q9Y5P0 310 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 DOCK9Q9BZ29 2069 aa14.54□□□□□ -0.08
EFNB1-201ENST00000204961 ANKDD1BA6NHY2 528 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 LEFTY2O00292 366 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 TLL1O43897 1013 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 SULT1C4O75897 302 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 TCEA1P23193 301 aaKnown RBP14.53□□□□□ -0.08
EFNB1-201ENST00000204961 MESP2Q0VG99 397 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 DGUOKQ16854 277 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 ZNF385BQ569K4 471 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 LY6G5CQ5SRR4 150 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 CHST9Q7L1S5 443 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 PTOV1Q86YD1 416 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 DTX3Q8N9I9 347 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 YME1L1Q96TA2 773 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 ERVK13-1Q9NX77 482 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 INHBBP09529 407 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 HOXA9P31269 272 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 CCR2P41597 374 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 PFN3P60673 137 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 HBA1P69905 142 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 EXOC3L2Q2M3D2 409 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 ZZZ3Q8IYH5 903 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 OR8H2Q8N162 312 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 SVOPLQ8N434 492 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 ARMC5Q96C12 935 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 SPNS1Q9H2V7 528 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 USE1Q9NZ43 259 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 SPATA7Q9P0W8 599 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 CDH7Q9ULB5 785 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 TAS2R50P59544 299 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 HSPB3Q12988 150 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 TIGD6Q17RP2 521 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 FAM214AQ32MH5 1076 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 DMRTB1Q96MA1 342 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 OR4K3Q96R72 315 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 NTMT1Q9BV86 223 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 TTLL2Q9BWV7 592 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 ACOT13Q9NPJ3 140 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 SNX11Q9Y5W9 270 aa14.53□□□□□ -0.08
EFNB1-201ENST00000204961 AQP9O43315 295 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 CCNDBP1O95273 360 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 C8AP07357 584 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 DNAJA1P31689 397 aaKnown RBP14.52□□□□□ -0.08
EFNB1-201ENST00000204961 SF3B4Q15427 424 aaKnown RBP eCLIP14.52□□□□□ -0.08
EFNB1-201ENST00000204961 KCNJ8Q15842 424 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 LHX8Q68G74 356 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 DEF8Q6ZN54 512 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 TRIM46Q7Z4K8 759 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 GATAD2AQ86YP4 633 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 LGI4Q8N135 537 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 GLB1L3Q8NCI6 653 aaPredicted RBP14.52□□□□□ -0.08
EFNB1-201ENST00000204961 ADAMTS16Q8TE57 1224 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 SCRN2Q96FV2 425 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 CDK5RAP1Q96SZ6 601 aaKnown RBP14.52□□□□□ -0.08
EFNB1-201ENST00000204961 CENPOQ9BU64 300 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 IL1RAPQ9NPH3 570 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 DNAJC27Q9NZQ0 273 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 TRPS1Q9UHF7 1281 aa14.52□□□□□ -0.08
EFNB1-201ENST00000204961 FADS2P1A8MWK0 482 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 TGM5O43548 720 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 UGT2B11O75310 529 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 PCMT1P22061 227 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 SPINT3P49223 89 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 LSM11P83369 360 aaKnown RBP eCLIP14.52□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF846Q147U1 533 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 MAD2L1BPQ15013 274 aaPredicted RBP14.52□□□□□ -0.09
EFNB1-201ENST00000204961 ENTHD1Q8IYW4 607 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 OR10G2Q8NGC3 310 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 TRUB1Q8WWH5 349 aaKnown RBP14.52□□□□□ -0.09
EFNB1-201ENST00000204961 ASB11Q8WXH4 323 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 AP2M1Q96CW1 435 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 OR5M11Q96RB7 305 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 SLC35A5Q9BS91 424 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 RNF6Q9Y252 685 aa14.52□□□□□ -0.09
EFNB1-201ENST00000204961 H7C0S8 307 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 TNNI3P19429 210 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 SLBPQ14493 270 aaKnown RBP eCLIP14.51□□□□□ -0.09
EFNB1-201ENST00000204961 FAM26DQ5JW98 314 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 KIAA1614Q5VZ46 1190 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 PLPP4Q5VZY2 271 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ATG9BQ674R7 924 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 RBM45Q8IUH3 476 aaKnown RBP14.51□□□□□ -0.09
EFNB1-201ENST00000204961 USP7Q93009 1102 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 UCN3Q969E3 161 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 VPS35Q96QK1 796 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF347Q96SE7 839 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 BEX2Q9BXY8 128 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ANKRA2Q9H9E1 313 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 RIMKLBQ9ULI2 386 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 FEZF1A0PJY2 475 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 CTDSP2O14595 271 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 PPM1DO15297 605 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 PTPN6P29350 595 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 GRK3P35626 688 aa14.51□□□□□ -0.09
EFNB1-201ENST00000204961 ST3GAL4Q11206 333 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms