RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 PCDHB14Q9Y5E9 798 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 E2F3O00716 465 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 FBP2O00757 339 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 PRLP01236 227 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 IL3P08700 152 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ELK4P28324 431 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 AVPR1BP47901 424 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 BTN3A2P78410 334 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 UBXN2BQ14CS0 331 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 COQ5Q5HYK3 327 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 CATSPEREQ5SY80 951 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ENPP6Q6UWR7 440 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 BHLHA9Q7RTU4 235 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 GPR135Q8IZ08 494 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 LMNTD1Q8N9Z9 388 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 TMEM125Q96AQ2 219 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ISG20Q96AZ6 181 aaKnown RBP12.65□□□□□ -0.38
HDAC7-201ENST00000080059 VMP1Q96GC9 406 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 SMOXQ9NWM0 555 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ACSL6Q9UKU0 697 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ZNF451Q9Y4E5 1061 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 FESP07332 822 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 BLVRAP53004 296 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 OLR1P78380 273 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ATP6AP1Q15904 470 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 SPATS1Q496A3 300 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 OR2A12Q8NGT7 310 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 WDR48Q8TAF3 677 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 FGF13Q92913 245 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 RAB7BQ96AH8 199 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 SLC22A18Q96BI1 424 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 ZNF689Q96CS4 500 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-201ENST00000080059 BIRC8Q96P09 236 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 PLAC1Q9HBJ0 212 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 POLMQ9NP87 494 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-201ENST00000080059 PTGFRNQ9P2B2 879 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 SEC16AO15027 2179 aa12.65□□□□□ -0.38
HDAC7-201ENST00000080059 PTPRZ1P23471 2315 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ARHGEF33A8MVX0 844 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 GTPBP1O00178 669 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 OXTRP30559 389 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ZXDBP98169 803 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 KRR1Q13601 381 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ZNF234Q14588 700 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PARS2Q7L3T8 475 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 CAMKK1Q8N5S9 505 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 INPP5KQ9BT40 448 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 TAS2R9Q9NYW1 312 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 COL11A1P12107 1806 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 XPNPEP2O43895 674 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PRMT3O60678 531 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PRG2P13727 222 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 MTHFD2P13995 350 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 TIMP2P16035 220 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ITPKBP27987 946 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PDHA2P29803 388 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PON2Q15165 354 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 VTCN1Q7Z7D3 282 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 GPATCH1Q9BRR8 931 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 CPEB1Q9BZB8 566 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 PCDHB11Q9Y5F2 797 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 VEGFDO43915 354 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 AIREO43918 545 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ZDHHC11BP0C7U3 371 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 CD9P21926 228 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 GTF2E2P29084 291 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 MADCAM1Q13477 382 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 CST6Q15828 149 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 ZBED5Q49AG3 693 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 CADM2Q8N3J6 435 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 GPR151Q8TDV0 419 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 GEMIN6Q8WXD5 167 aaKnown RBP12.64□□□□□ -0.39
HDAC7-201ENST00000080059 SLC38A3Q99624 504 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 HS3ST2Q9Y278 367 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 HEBP2Q9Y5Z4 205 aa12.64□□□□□ -0.39
HDAC7-201ENST00000080059 C9P02748 559 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 MRPL28Q13084 256 aaKnown RBP12.63□□□□□ -0.39
HDAC7-201ENST00000080059 SLC13A2Q13183 592 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 HNRNPA1L2Q32P51 320 aaKnown RBP12.63□□□□□ -0.39
HDAC7-201ENST00000080059 CRB2Q5IJ48 1285 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 CCDC116Q8IYX3 515 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 CHCHD4Q8N4Q1 142 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 PDPRQ8NCN5 879 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 FATE1Q969F0 183 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 BORCS5Q969J3 196 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 MAL2Q969L2 176 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 ACPTQ9BZG2 426 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 ACSL5Q9ULC5 683 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 MRPS7Q9Y2R9 242 aaKnown RBP12.63□□□□□ -0.39
HDAC7-201ENST00000080059 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-201ENST00000080059 CAPN5O15484 640 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-201ENST00000080059 B3GALT2O43825 422 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 GRIA2P42262 883 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 CLCN7P51798 805 aa12.63□□□□□ -0.39
HDAC7-201ENST00000080059 RPS6KA3P51812 740 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms