RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CCM2Q9BSQ5 444 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 TBC1D14Q9P2M4 693 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 TSC22D4Q9Y3Q8 395 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 PCDHGA10Q9Y5H3 936 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 FAM220BPB1ANY3 271 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 WNT9AO14904 365 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 KPNA5O15131 536 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CATP04040 527 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 PRPS1L1P21108 318 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CD6P30203 668 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 ST8SIA6P61647 398 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 MC1RQ01726 317 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 DUOXA1Q1HG43 343 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CYP27C1Q4G0S4 372 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 P2RY8Q86VZ1 359 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 ZNF740Q8NDX6 193 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 OR7G3Q8NG95 312 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
CTNS-201ENST00000046640 CFAP20Q9Y6A4 193 aaKnown RBP12.65□□□□□ -0.38
CTNS-201ENST00000046640 PSIP1O75475 530 aaKnown RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 EPN2O95208 641 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 KCNK5O95279 499 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ITIH1P19827 911 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 TNFRSF1BP20333 461 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 BMPR1AP36894 532 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 MMP12P39900 470 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 NRIP1P48552 1158 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ABHD18Q0P651 414 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 SP140Q13342 867 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 CLCA4Q14CN2 919 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 FNDC3BQ53EP0 1204 aaKnown RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 ERAP2Q6P179 960 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 PLD3Q8IV08 490 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 CSGALNACT1Q8TDX6 532 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ZNF480Q8WV37 535 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 TESCQ96BS2 214 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 REXO5Q96IC2 774 aaKnown RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 DACH2Q96NX9 599 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 OR51B5Q9H339 312 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 IL23AQ9NPF7 189 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 AKIP1Q9NQ31 210 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 MAN2B2Q9Y2E5 1009 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 KIAA1671Q9BY89 1806 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 OPN1SWP03999 348 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ADH5P11766 374 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ZNF24P17028 368 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 NKX2-5P52952 324 aaPredicted RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 VLDLRP98155 873 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 CAMK1Q14012 370 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 DGUOKQ16854 277 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 CDKL4Q5MAI5 379 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 TTC29Q8NA56 475 aaPredicted RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 PIK3C3Q8NEB9 887 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 DUSP26Q9BV47 211 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 ASPSCR1Q9BZE9 553 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 PCYT1BQ9Y5K3 369 aaPredicted RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
CTNS-201ENST00000046640 USP34Q70CQ2 3546 aa12.64□□□□□ -0.39
CTNS-201ENST00000046640 MGAT4DA6NG13 374 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 EIF3FO00303 357 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 SLC16A5O15375 505 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SCN2BO60939 215 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 EFCAB14O75071 495 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 CNOT3O75175 753 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 VIPP01282 170 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 RETP07949 1114 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 GABARAPL2P60520 117 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TBPL1P62380 186 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 RAE1P78406 368 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 HTRA4P83105 476 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 EPS8Q12929 822 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TOP3AQ13472 1001 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 NFE2L1Q14494 772 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.63□□□□□ -0.39
CTNS-201ENST00000046640 LIPJQ5W064 366 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 CPZQ66K79 652 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 HORMAD1Q86X24 394 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 FOPNLQ96NB1 174 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SORBS1Q9BX66 1292 aaKnown RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 MROQ9BYG7 248 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 C6orf62Q9GZU0 229 aaPredicted RBP12.63□□□□□ -0.39
CTNS-201ENST00000046640 SPNS1Q9H2V7 528 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TPT1P8Q9HAU6 139 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SCN3BQ9NY72 215 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 TMED5Q9Y3A6 229 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 SLC5A10A0PJK1 596 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 NPC1O15118 1278 aa12.63□□□□□ -0.39
CTNS-201ENST00000046640 AQP9O43315 295 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms