RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PGBD3Q8N328 593 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 IL17RDQ8NFM7 739 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 DBF4BQ8NFT6 615 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 MYLIPQ8WY64 445 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 TSEN34Q9BSV6 310 aaKnown RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 EMILIN2Q9BXX0 1053 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 NUAK2Q9H093 628 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 GPATCH2Q9NW75 528 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 BOLA1Q9Y3E2 137 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 PCDHB7Q9Y5E2 793 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 TMEM202A6NGA9 273 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 SAGE2PA6NJ88 616 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 SAP18O00422 153 aaKnown RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 ZNF821O75541 412 aaPredicted RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 UGT2B15P54855 530 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 CCL23P55773 120 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 DOC2AQ14183 400 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 IRF3Q14653 427 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 BCL7AQ4VC05 210 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 C10orf62Q5T681 223 aaPredicted RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 CPTPQ5TA50 214 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 TXNDC8Q6A555 127 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 OR8H2Q8N162 312 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 OR5AK3PQ8NH89 298 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 CSGALNACT1Q8TDX6 532 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 DMRTB1Q96MA1 342 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 CDK5RAP1Q96SZ6 601 aaKnown RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 TCF25Q9BQ70 676 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 SYT17Q9BSW7 474 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 TMEM161AQ9NX61 479 aa13.51□□□□□ -0.25
USH1C-201ENST00000005226 CFAP20Q9Y6A4 193 aaKnown RBP13.51□□□□□ -0.25
USH1C-201ENST00000005226 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 ANXA4P09525 319 aaPredicted RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 JUPP14923 745 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 PIK3CBP42338 1070 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 RAE1P78406 368 aaKnown RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 MC1RQ01726 317 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 SMARCB1Q12824 385 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 MTA1Q13330 715 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 GPR33Q49SQ1 333 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 ZNF385BQ569K4 471 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 ZMAT1Q5H9K5 638 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 OR4A15Q8NGL6 344 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 VANGL1Q8TAA9 524 aaPredicted RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 FCGR1BQ92637 280 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 SCAMP4Q969E2 229 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 RMI1Q9H9A7 625 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 TRIM39Q9HCM9 518 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 EXOSC4Q9NPD3 245 aaKnown RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 IMPAD1Q9NX62 359 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 UGT2A1Q9Y4X1 527 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 OR2AG2A6NM03 316 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 AOC2O75106 756 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 MED26O95402 600 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 CKMT1AP12532 417 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 PRPH2P23942 346 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 AZGP1P25311 298 aaKnown RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 CD70P32970 193 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 PRKCZQ05513 592 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 TSTA3Q13630 321 aaPredicted RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 TCTN1Q2MV58 587 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 GGTA1PQ4G0N0 100 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 KLHL17Q6TDP4 642 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 NEK10Q6ZWH5 1172 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 BBS7Q8IWZ6 715 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 NFKBIDQ8NI38 313 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 ADAMTS19Q8TE59 1207 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 CNPPD1Q9BV87 410 aa13.5□□□□□ -0.25
USH1C-201ENST00000005226 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
USH1C-201ENST00000005226 C1orf226A1L170 272 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 FAM47E-STBD1D6RA91 191 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 H7C4K7 107 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 MRPS14O60783 128 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 ARHGEF15O94989 841 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 MFN2O95140 757 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 PTTG1O95997 202 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 GABRB1P18505 474 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 SELENOWP63302 87 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 ZNF45Q02386 682 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 NAE1Q13564 534 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 VEZF1Q14119 521 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 LYPLAL1Q5VWZ2 237 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 KBTBD8Q8NFY9 601 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 OR8J2Q8NGG1 315 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 COL21A1Q96P44 957 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 IL4I1Q96RQ9 567 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 SGK2Q9HBY8 427 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 ANKHQ9HCJ1 492 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 PLCXD1Q9NUJ7 323 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 FKBP14Q9NWM8 211 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 FAM120CQ9NX05 1096 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 SPATA7Q9P0W8 599 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 GNG14A0A1W2PPG7 69 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 LOC110117498-PIK3R3F6TDL0 507 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms