RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Fbxw11Q5SRY7 542 aaKnown RBP11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Rhbdf2Q80WQ6 827 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Il17rdQ8JZL1 738 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cmss1Q9CZT6 276 aaKnown RBP11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arfgap3Q9D8S3 523 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Psma6Q9QUM9 246 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr1056A2AVY0 313 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mgl2A9XX86 381 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm10479K7N6H4 105 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gp5O08742 567 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cyp27b1O35084 507 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Trdmt1O55055 415 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mocs1Q5RKZ7 636 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ppp3r2Q63811 179 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp759Q7M6X3 721 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr371Q8VGB8 312 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Adamts6D3Z1A5 1117 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 TtlP38585 377 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gdf6P43028 454 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mat2aQ3THS6 395 aaKnown RBP11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp429Q7M6Y0 485 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 SowahaQ8BLS7 548 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 CpzQ8R4V4 654 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Pnp2Q9D8C9 305 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Yipf5Q9EQQ2 257 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 6720489N17RikA0A1Y7VJW0 127 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tomm5B1AXP6 51 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cyp2j5O54749 501 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cer1O55233 272 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fzd1O70421 642 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Impdh1P50096 514 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 F8a1Q00558 380 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nxf3Q4ZGD9 553 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Eif2dQ61211 570 aaKnown RBP11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Aoc2Q812C9 757 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tm9sf4Q8BH24 643 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sdr9c7Q8K3P0 313 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gtf2f2Q8R0A0 249 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tmem185bQ8R3R5 350 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cops8Q8VBV7 209 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Q9CQC3 228 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr955Q9EQ97 314 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Skint3A7TZF0 458 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm13212B1ASQ7 799 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 En2P09066 324 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp60P16374 707 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cpa6Q5U901 438 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 RbfaQ6P3B9 350 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lcn9Q9D267 178 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 ProdhQ9WU79 599 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Klhdc7aA2APT9 773 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 H2-M11F6U8V3 335 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Oaz2O08608 189 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 CcnkO88874 554 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 BckdhaP50136 442 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 AhcyP50247 432 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Lcmt2Q8BYR1 686 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zdhhc1Q8R0N9 484 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ptcd2Q8R3K3 381 aaKnown RBP11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ubqln5Q9D4I8 510 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr630Q9EQQ7 319 aa11.62□□□□□ -0.55
Trim56-201ENSMUST00000054384 Olfr592E9PYB3 312 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm37240E9QAY5 252 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Tas2r7P59530 312 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 StradaQ3UUJ4 431 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ranbp3Q9CT10 491 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Ap1s2Q9DB50 160 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp978A2A7I1 335 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nt5c1aA3KFX0 365 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Zfp605E9QAH2 694 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 PepdQ11136 493 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fam71f1Q3UZD7 341 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Dsg1cQ7TSF0 911 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gpr61Q8C010 449 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Fam161aQ8QZV6 448 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Agpat3Q9D517 376 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 TsnaxQ9QZE7 290 aaKnown RBP11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm8127E9Q0P0 100 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Aldh3b2E9Q3E1 479 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm3072F6SKY8 209 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm17654F7AXR3 209 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Man2a1P27046 1150 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Cntn2Q61330 1040 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Amigo2Q80ZD9 519 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Arl6ip5Q8R5J9 188 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Nop16Q9CPT5 178 aaKnown RBP11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Znhit2Q9QY66 399 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 TktP40142 623 aaKnown RBP11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gdpgp1Q3TLS3 386 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 DhpsQ3TXU5 369 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Oxa1lQ8BGA9 433 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Txnl4bQ8BUH1 149 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Sav1Q8VEB2 386 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Esp22A8R0V4 111 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Gm21915J3QPM7 133 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Mtnd1P03888 318 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 AbraclQ4KML4 81 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Clec4a4Q5YIR8 236 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 Foxd1Q61345 456 aa11.61□□□□□ -0.55
Trim56-201ENSMUST00000054384 HjurpQ6PG16 667 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 24.7 ms