RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Oas1eA0A0J9YV76 386 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mup18A2BIM8 181 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Izumo4D3Z690 227 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm4775F7ANJ3 135 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn2r3H3BJ88 915 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn1r25H3BLP0 302 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 TspearJ3S6Y1 670 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rgs4O08899 205 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Kpna4O35343 521 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mup11P04938 181 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Smpd1Q04519 627 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fam47cQ14BE7 430 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Upf3aQ3ULJ3 422 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Pin1rt1Q3ULQ2 159 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 P2rx5Q3UYI1 455 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm21320Q4FZE8 181 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tapt1Q4VBD2 564 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cdh12Q5RJH3 794 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Mfsd13aQ6PDE8 519 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Yod1Q8CB27 343 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Klf11Q8K1S5 502 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Swi5Q8K3D3 89 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Chst15Q91XQ5 561 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 EbplQ9D0P0 206 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rgs17Q9QZB0 210 aa14.32□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmem131O70472 1877 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ighv11-2A0A075B5R8 117 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 FanceB8JJD6 213 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fam151bD3YUE4 279 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Olfr564E9PWA8 316 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tex16F6WNY1 1150 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm8922F6XVS9 199 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm17174M0QWQ9 212 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cacng1O70578 223 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cyp1a1P00184 524 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 H2-AaP01910 256 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tcea3P23881 347 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Crybb2P62696 205 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gdf9Q07105 441 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Alg10bQ3UGP8 474 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm648Q3UJ22 213 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Arhgef9Q3UTH8 516 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Naa11Q3UX61 218 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tpd52Q62393 224 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Katnb1Q8BG40 658 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Coq9Q8K1Z0 313 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 CcsapQ8QZT2 252 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 NifkQ91VE6 317 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Plpp3Q99JY8 312 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 NtpcrQ9CQA9 190 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rnf146Q9CZW6 359 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rps19Q9CZX8 145 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 NaaaQ9D7V9 362 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Nfkb2Q9WTK5 899 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ramp2Q9WUP0 189 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 RbpmsQ9WVB0 197 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Kcnk7Q9Z2T1 307 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Pcm1Q9R0L6 2025 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Olfr566A0A1B0GST0 319 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Znf382B2RXC5 579 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 8030474K03RikE9Q4Y8 554 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Shisa8J3QNX5 399 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Suv39h1O54864 412 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cbx4O55187 551 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rpl6P47911 296 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 OstnP61364 130 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Barhl1P63157 327 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cd163Q2VLH6 1121 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Fubp3Q3TIX6 575 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm5113Q3UGK8 141 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 ClpbQ60649 677 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ggt1Q60928 568 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cpeb2Q812E0 521 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Csgalnact1Q8BJQ9 530 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cpsf4Q8BQZ5 211 aaKnown RBP14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cfap20Q8BTU1 193 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Lrrc56Q8K375 552 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn1r81Q8R286 306 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rnf130Q8VEM1 419 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Hyal6Q9D4E9 494 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Lpar3Q9EQ31 354 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Slc19a2Q9EQN9 498 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cdc42ep5Q9Z0X0 150 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gipc2Q9Z2H7 314 aa14.31□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Polr2aP08775 1970 aaKnown RBP14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tceal7A3KGA4 98 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Ccdc7bE9Q9Y3 381 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gm11397F6V5V4 377 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Dcdc2bF7BCK0 340 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Vmn2r97K7N6Z2 861 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Chst3O88199 472 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Gh1P06880 216 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Rbm15Q0VBL3 962 aaKnown RBP14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cdkl4Q3TZA2 342 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Nxf3Q4ZGD9 553 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Tmem199Q5SYH2 208 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cntn2Q61330 1040 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Cd300aQ6SJQ0 318 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Nipal3Q8BGN5 410 aa14.3□□□□□ -0.12
Ushbp1-201ENSMUST00000049184 Serpinb9gQ8VHQ1 377 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms