RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Klf8Q8BLM0 355 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Zmiz2Q8CIE2 920 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 NmuQ9QXK8 174 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Zfp53Q9Z117 652 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cul9Q80TT8 1865 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Aldh3b2E9Q3E1 479 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pdzd7E9Q9W7 1021 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 CtsdP18242 410 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 TrhrP21761 393 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Sept4P28661 478 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rhox4fQ2MDF8 205 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rhox4cQ2MDG1 205 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cdk10Q3UMM4 360 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cdkn2cQ60772 168 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tfap2bQ61313 459 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pea15Q62048 130 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Orm3Q63805 206 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Eci3Q78JN3 317 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ddhd2Q80Y98 699 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 NrrosQ8BMT4 693 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Sp110Q8BVK9 445 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cmtr2Q8BWQ4 767 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Nhlrc2Q8BZW8 725 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gpr61Q8C010 449 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Thumpd1Q99J36 350 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Dhrs7bQ99J47 323 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Atp13a2Q9CTG6 1169 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Trmt5Q9D0C4 501 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rhox4aQ9D3I8 205 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rrp8Q9DB85 457 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pias4Q9JM05 507 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Elf4Q9Z2U4 655 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm17190V9GX38 357 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ankle1A8VU90 534 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cyp2a22B2RXZ2 492 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tex16F6WNY1 1150 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 H2-T24F8VQG4 363 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Vmn2r52L7N2B2 852 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Phox2bO35690 314 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 EgfP01132 1217 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rpl6P47911 296 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Adra1bP97717 514 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Lrfn1Q2WF71 766 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Prr27Q3SYJ2 352 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ctc1Q5SUQ9 1212 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Crhr2Q60748 411 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Q6P2K3 674 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tas2r110Q7M712 333 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 SnupnQ80W37 358 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Amigo2Q80ZD9 519 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Adnp2Q8CHC8 1165 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cbr4Q91VT4 236 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Spatc1lQ9D9W0 342 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 P33monoxQ9DBN4 303 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 MecrQ9DCS3 373 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 NckipsdQ9ESJ4 714 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ighg3A0A1Y7VJN6 399 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Bclaf3A2AG58 752 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm45692D3Z0A0 150 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm3149E9PW52 257 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm7073E9QAS1 335 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm8362K7N6Y6 257 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Olfr1121L7MTT1 314 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Kcnk1O08581 336 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 ShdO88834 343 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gabra3P26049 492 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pxmp2P42925 194 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 AhcyP50247 432 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Atf4Q06507 349 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Hp1bp3Q3TEA8 554 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Trappc13Q3TIR1 417 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 SynaQ5G5D5 617 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ofcc1Q8BGX4 166 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gen1Q8BMI4 908 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Prps1l1Q8C5R8 318 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Csnka2ipQ8CH19 720 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Slc45a3Q8K0H7 553 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rnf208Q8K0W3 265 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Tex46Q9CPU3 165 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rpl4Q9D8E6 419 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Zfp869Q9DC47 529 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Il21Q9ES17 146 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 PrelpQ9JK53 378 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Bag6Q9Z1R2 1154 aaKnown RBP8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Mbd4Q9Z2D7 554 aa8.91□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm42372A0A1B0GT27 204 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Zfp978A2A7I1 335 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gpr155A2AWR3 868 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cyp2b23E9Q593 491 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gm20441G3UYJ7 252 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Fpr-s1O08790 351 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Cdh1P09803 884 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 LipcP27656 510 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 MatkP41242 505 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Gng2P63213 71 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Rsu1Q01730 277 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Pnliprp1Q5BKQ4 473 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ppp5cQ60676 499 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Ostf1Q62422 215 aa8.9□□□□□ -0.98
Ccdc47-201ENSMUST00000002043 Itln1bQ80ZA0 313 aa8.9□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 73 ms